myRT

myRT report for GCA_000647495.1_02-07607_clc_bio_denovo

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Seq: AQGN01000009.1 (68715 bp)
Overview 1 RT 1: 41480-45116 bp Neighborhood of RT #1 [41480, 45116] DUF1281 DUF1281_C RVT_N RVT-GII GIIM HNHc Feature: gene Location: 41480-42406 bp Feature: domain Description: DUF1281 Location: 41573-42101 bp Feature: domain Description: DUF1 281 Location: 41 573-421 01 bp Feature: domain Description: DUF1281_C Location: 42107-42347 bp Feature: domain Description: DUF1 281 _C Location: 421 07-42347 bp Feature: gene Location: 42410-42583 bp Feature: gene Location: 42943-44643 bp Feature: RT Description: RVT_N Location: 42997-43240 bp Feature: RT Description: RVT_N Location: 42997-43240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43285-43921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43285-43921 bp Feature: domain Description: GIIM Note: maturase Location: 43972-44206 bp Feature: domain Description: GIIM Note: maturase Location: 43972-44206 bp Feature: domain Description: HNHc Note: nucleases Location: 44437-44587 bp Feature: domain Description: HNHc Note: nucleases Location: 44437-44587 bp Feature: gene Location: 44680-44808 bp Feature: gene Location: 44859-45116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), DUF1281_C (pfam18406), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: AQGN01000033.1 (3430 bp)
Overview 1 RT 1: 2-3224 bp Neighborhood of RT #1 [2, 3232] DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 2-388 bp Feature: domain Description: DUF932 Location: 8-353 bp Feature: domain Description: DUF932 Location: 8-353 bp Feature: gene Location: 561-2339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 822-1617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 2 -1617 bp Feature: domain Description: Intron_maturas2 Location: 1743-1968 bp Feature: domain Description: Intron_maturas2 Location: 1743-1968 bp Feature: domain Description: HNHc Note: nucleases Location: 2163-2313 bp Feature: domain Description: HNHc Note: nucleases Location: 2 163-2 313 bp Feature: gene Location: 2831-3232 bp Feature: domain Description: DUF932 Location: 2942-3224 bp Feature: domain Description: DUF932 Location: 2 942 -32 2 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: AQGN01000103.1 (17762 bp)
Overview 1 RT 1: 14237-17759 bp Neighborhood of RT #1 [14237, 17759] zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM Feature: gene Location: 14237-15568 bp Feature: domain Description: zf-IS66 Location: 14549-14681 bp Feature: domain Description: zf-IS66 Location: 14549-14681 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14732-15557 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1473 2-15557 bp Feature: gene Location: 15809-15970 bp Feature: gene Location: 16063-17295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16264-16918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16264-16918 bp Feature: domain Description: GIIM Note: maturase Location: 16996-17218 bp Feature: domain Description: GIIM Note: maturase Location: 16996-17218 bp Feature: gene Location: 17478-17759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)