myRT

myRT report for GCA_000647615.1_PseAerID4365_1.0

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Seq: ATAI01000124.1 (82533 bp)
Overview 1 RT 1: 1-8182 bp 2 RT 2: 24441-32644 bp Neighborhood of RT #1 [1, 8184] RVT_N RVT-GII GIIM PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [24441, 32658] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 Feature: gene Location: 1-1406 bp Feature: RT Description: RVT_N Location: 58-298 bp Feature: RT Description: RVT_N Location: 58-298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 346-982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 346-982 bp Feature: domain Description: GIIM Note: maturase Location: 1036-1267 bp Feature: domain Description: GIIM Note: maturase Location: 1 036-1 267 bp Feature: gene Location: 2487-6224 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 2595-3252 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 2595-3252 bp Feature: domain Description: PRK09776 Location: 3465-3936 bp Feature: domain Description: PRK09776 Location: 3465-3936 bp Feature: domain Description: PAS Location: 3981-4518 bp Feature: domain Description: PAS Location: 3981 -451 8 bp Feature: domain Description: PRK10060 Location: 4527-6174 bp Feature: domain Description: PRK1 0060 Location: 4527-61 74 bp Feature: gene Location: 6331-8184 bp Feature: domain Description: PRK05658 Location: 6343-8182 bp Feature: domain Description: PRK05658 Location: 6343-81 82 bp Feature: gene Location: 24441-25733 bp Feature: domain Description: PRK10770 Location: 24531-25725 bp Feature: domain Description: PRK1 0770 Location: 24531 -25725 bp Feature: gene Location: 25714-28524 bp Feature: domain Description: LptD Location: 25909-28510 bp Feature: domain Description: LptD Location: 25909-2851 0 bp Feature: gene Location: 28657-30369 bp Feature: RT Description: RVT_N Location: 28714-28957 bp Feature: RT Description: RVT_N Location: 2871 4-28957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29002-29638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29002-29638 bp Feature: domain Description: YkfC Location: 29845-29998 bp Feature: domain Description: YkfC Location: 29845-29998 bp Feature: domain Description: HNH Note: nucleases Location: 30175-30313 bp Feature: domain Description: HNH Note: nucleases Location: 301 75-3031 3 bp Feature: gene Location: 31211-31345 bp Feature: gene Location: 31642-32658 bp Feature: domain Description: COG3178 Location: 31645-32644 bp Feature: domain Description: COG31 78 Location: 31 645-32644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452)
YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family )

Seq: ATAI01000097.1 (91087 bp)
Overview 1 RT 1: 32769-37898 bp Neighborhood of RT #1 [32769, 37909] PRK13360 COG3450 RVT_N RVT-GII YkfC HNHc rpmG RpmB Feature: gene Location: 32769-34103 bp Feature: domain Description: PRK13360 Location: 32772-34095 bp Feature: domain Description: PRK13360 Location: 32 772 -34095 bp Feature: gene Location: 34169-34531 bp Feature: domain Description: COG3450 Location: 34172-34517 bp Feature: domain Description: COG3450 Location: 34172 -34517 bp Feature: gene Location: 34738-36444 bp Feature: RT Description: RVT_N Location: 34795-35035 bp Feature: RT Description: RVT_N Location: 34795-35035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35083-35719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35083-35719 bp Feature: domain Description: YkfC Location: 35941-36085 bp Feature: domain Description: YkfC Location: 35941-36085 bp Feature: domain Description: HNHc Note: nucleases Location: 36214-36388 bp Feature: domain Description: HNHc Note: nucleases Location: 362 14-36388 bp Feature: gene Location: 37506-37661 bp Feature: domain Description: rpmG Location: 37509-37653 bp Feature: domain Description: rpmG Location: 37509-37653 bp Feature: gene Location: 37673-37909 bp Feature: domain Description: RpmB Location: 37676-37898 bp Feature: domain Description: RpmB Location: 37676-37898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13360 (omega amino acid--pyruvate transaminase; Provisional), COG3450 (Predicted enzyme of the cupin superfamily ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), rpmG (PRK00595), RpmB (COG0227)