myRT

myRT report for GCA_000647895.1_CTM1.0

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Seq: APJS01000114.1 Clostridium tetanomorphum DSM 665 contig114, whole genome shotgun sequence (2038 bp)
Overview 1 RT 1: 316-1185 bp Neighborhood of RT #1 [316, 1190] RVT-GII RVT-GII GIIM Feature: gene Location: 316-444 bp Feature: gene Location: 437-925 bp Ori: KAJ49606.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443-893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443-893 bp Feature: gene Location: 894-1190 bp Ori: KAJ49607.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 897-999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 897-999 bp Feature: domain Description: GIIM Note: maturase Location: 1053-1185 bp Feature: domain Description: GIIM Note: maturase Location: 1 053-1 1 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: APJS01000159.1 Clostridium tetanomorphum DSM 665 contig160, whole genome shotgun sequence (1337 bp)
Overview 1 RT 1: 69-1008 bp Neighborhood of RT #1 [69, 1337] RVT-GII Feature: gene Location: 69-1337 bp Ori: KAJ49241.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 324-1008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 4-1008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: APJS01000100.1 Clostridium tetanomorphum DSM 665 contig100, whole genome shotgun sequence (1413 bp)
Overview 1 RT 1: 136-1413 bp Neighborhood of RT #1 [136, 1413] RVT-GII GIIM Feature: gene Location: 136-699 bp Ori: KAJ49759.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142-286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142-286 bp Feature: domain Description: GIIM Note: maturase Location: 295-526 bp Feature: domain Description: GIIM Note: maturase Location: 295-526 bp Feature: gene Location: 818-1413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: APJS01000097.1 Clostridium tetanomorphum DSM 665 contig97, whole genome shotgun sequence (2393 bp)
Overview 1 RT 1: 703-2394 bp Neighborhood of RT #1 [703, 2393] HTH_ARAC RVT-GII Feature: gene Location: 703-1650 bp Ori: KAJ49773.1 Feature: domain Description: HTH_ARAC Location: 1399-1645 bp Feature: domain Description: HTH_ARAC Location: 1399-164 5 bp Feature: gene Location: 2159-2287 bp Feature: gene Location: 2280-2393 bp Ori: KAJ49775.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2286-2394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2286-2394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARAC (smart00342), RVT-GII

Seq: APJS01000160.1 Clostridium tetanomorphum DSM 665 contig161, whole genome shotgun sequence (8281 bp)
Overview 1 RT 1: 5352-8133 bp Neighborhood of RT #1 [5352, 8189] SalY RVT-GII Feature: gene Location: 5352-7322 bp Ori: KAJ49238.1 Feature: domain Description: SalY Location: 5355-7269 bp Feature: domain Description: SalY Location: 5 35 5 -7269 bp Feature: gene Location: 7817-7945 bp Feature: gene Location: 7938-8189 bp Ori: KAJ49240.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7944-8133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7944-8133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SalY (COG0577), RVT-GII

Seq: APJS01000153.1 Clostridium tetanomorphum DSM 665 contig154, whole genome shotgun sequence (2055 bp)
Overview 1 RT 1: 135-1004 bp Neighborhood of RT #1 [135, 1009] RVT-GII RVT-GII GIIM Feature: gene Location: 135-263 bp Feature: gene Location: 256-744 bp Ori: KAJ49267.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262-712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26 2-712 bp Feature: gene Location: 713-1009 bp Ori: KAJ49268.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 716-818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 716 -818 bp Feature: domain Description: GIIM Note: maturase Location: 872-1004 bp Feature: domain Description: GIIM Note: maturase Location: 872-1004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: APJS01000021.1 Clostridium tetanomorphum DSM 665 contig21, whole genome shotgun sequence (69066 bp)
Overview 1 RT 1: 65664-68922 bp Neighborhood of RT #1 [65664, 68927] PRK13780 PRK05764 RVT-GII RVT-GII Feature: gene Location: 65664-65921 bp Ori: KAJ52530.1 Feature: domain Description: PRK13780 Location: 65667-65910 bp Feature: domain Description: PRK137 80 Location: 65667 -65910 bp Feature: gene Location: 66025-67218 bp Ori: KAJ52531.1 Feature: domain Description: PRK05764 Location: 66031-67213 bp Feature: domain Description: PRK057 64 Location: 66031-67 213 bp Feature: gene Location: 68075-68431 bp Ori: KAJ52532.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68084-68393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68084-68393 bp Feature: gene Location: 68397-68927 bp Ori: KAJ52533.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68742-68922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 687 42-68922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13780 (phosphocarrier protein HPr; Provisional), PRK05764 (aspartate aminotransferase; Provisional), RVT-GII

Seq: APJS01000096.1 Clostridium tetanomorphum DSM 665 contig96, whole genome shotgun sequence (8290 bp)
Overview 1 RT 1: 1-2016 bp Neighborhood of RT #1 [1, 2016] RVT-GII GIIM HemG NapF Feature: gene Location: 1-127 bp Feature: gene Location: 246-797 bp Ori: KAJ49777.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252-396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252-396 bp Feature: domain Description: GIIM Note: maturase Location: 405-636 bp Feature: domain Description: GIIM Note: maturase Location: 405-636 bp Feature: gene Location: 1059-1835 bp Ori: KAJ49778.1 Feature: domain Description: HemG Location: 1062-1278 bp Feature: domain Description: HemG Location: 1062-1278 bp Feature: domain Description: NapF Location: 1566-1806 bp Feature: domain Description: NapF Location: 1566-18 06 bp Feature: gene Location: 1858-2016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HemG (COG4635), NapF (COG1145)

Seq: APJS01000213.1 Clostridium tetanomorphum DSM 665 contig214, whole genome shotgun sequence (2841 bp)
Overview 1 RT 1: 364-2795 bp Neighborhood of RT #1 [364, 2841] SASP HTH_ARAC RVT-GII Feature: gene Location: 364-570 bp Ori: KAJ48780.1 Feature: domain Description: SASP Location: 373-559 bp Feature: domain Description: SASP Location: 373-559 bp Feature: gene Location: 826-1773 bp Ori: KAJ48781.1 Feature: domain Description: HTH_ARAC Location: 1522-1768 bp Feature: domain Description: HTH_ARAC Location: 1522-1768 bp Feature: gene Location: 2282-2841 bp Ori: KAJ48782.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2627-2795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2627-279 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SASP (pfam00269), HTH_ARAC (smart00342), RVT-GII

Seq: APJS01000125.1 Clostridium tetanomorphum DSM 665 contig125, whole genome shotgun sequence (1833 bp)
Overview 1 RT 1: 1-1775 bp Neighborhood of RT #1 [1, 1775] RVT-GII RVT-GII Feature: gene Location: 1-936 bp Ori: KAJ49545.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46-730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46-730 bp Feature: gene Location: 1349-1546 bp Ori: KAJ49546.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1358-1535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1358-1535 bp Feature: gene Location: 1539-1775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII