myRT

myRT report for GCA_000649165.1_gbb20v01

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Seq: JHBU01000128.1 Bordetella bronchiseptica CA90 BB02 ctg7180000026103, whole genome shotgun sequence (35926 bp)
Overview 1 RT 1: 14586-22229 bp Neighborhood of RT #1 [14586, 22229] YhcG YhcG_C RMtype1_S_EcoKI-TRD2-CR2_like RMtype1_S_EcoKI-TRD2-CR2_like RVT-UG5 Phage_int_SAM_2 Integrase_1 Feature: gene Location: 14586-15626 bp Ori: KAK71781.1 Feature: domain Description: YhcG Location: 14655-14973 bp Feature: domain Description: YhcG Location: 1 4655-1 4973 bp Feature: domain Description: YhcG_C Location: 15123-15582 bp Feature: domain Description: YhcG_C Location: 1 51 23-1 5582 bp Feature: gene Location: 15619-17898 bp Ori: KAK71779.1 Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 15892-16429 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 1 5892-1 6429 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 16639-17215 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 1 6639-1 721 5 bp Feature: gene Location: 17988-21026 bp Ori: KAK71784.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 18483-18963 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 8483-1 8963 bp Feature: gene Location: 21060-21923 bp Ori: KAK71799.1 Feature: domain Description: Phage_int_SAM_2 Location: 21063-21324 bp Feature: domain Description: Phage_int_SAM_2 Location: 21 063-21 324 bp Feature: domain Description: Integrase_1 Location: 21372-21756 bp Feature: domain Description: Integrase_1 Location: 21 372-21 756 bp Feature: gene Location: 22116-22229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhcG (COG4804), YhcG_C, RMtype1_S_EcoKI-TRD2-CR2_like (cd17261), RVT-UG5, Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835)