myRT

myRT report for GCA_000661975.1_Pantoea_ananatis_LMG_2665

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Seq: JFZU01000014.1 Pantoea ananatis LMG 2665 scaffold12.1, whole genome shotgun sequence (171966 bp)
Overview 1 RT 1: 30964-34432 bp 2 RT 2: 52318-58784 bp Neighborhood of RT #1 [30964, 34434] Rve RVT-UG4 FimA PRK15287 Neighborhood of RT #2 [52318, 58825] SIR2_2 YjgR YjgR RVT-Retrons ABC_ATPase PHA02518 Feature: gene Location: 30964-31092 bp Feature: domain Description: Rve Location: 30967-31066 bp Feature: domain Description: Rve Location: 30967-31 066 bp Feature: gene Location: 31423-32265 bp Feature: gene Location: 32375-33355 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 32723-33170 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 32723-331 70 bp Feature: gene Location: 33378-33923 bp Feature: domain Description: FimA Location: 33417-33921 bp Feature: domain Description: FimA Location: 3341 7-33921 bp Feature: gene Location: 33934-34434 bp Feature: domain Description: PRK15287 Location: 33982-34432 bp Feature: domain Description: PRK1 5287 Location: 33982-34432 bp Feature: gene Location: 52318-53403 bp Feature: domain Description: SIR2_2 Location: 52741-53329 bp Feature: domain Description: SIR2_2 Location: 52741 -53329 bp Feature: gene Location: 53400-55214 bp Feature: domain Description: YjgR Location: 53844-54084 bp Feature: domain Description: YjgR Location: 53844-54084 bp Feature: domain Description: YjgR Location: 54750-55149 bp Feature: domain Description: YjgR Location: 54750-551 49 bp Feature: gene Location: 55568-56539 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 55697-56267 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 55697-56267 bp Feature: gene Location: 56536-57864 bp Feature: domain Description: ABC_ATPase Location: 56581-57271 bp Feature: domain Description: ABC_ATPase Location: 56581 -57271 bp Feature: gene Location: 58187-58825 bp Feature: domain Description: PHA02518 Location: 58199-58784 bp Feature: domain Description: PHA0251 8 Location: 581 99-58784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-UG4, FimA (pfam16970), PRK15287 (fimbrial minor subunit StfF), SIR2_2 (pfam13289), YjgR (COG0433), RVT-Retrons, ABC_ATPase (pfam09818), PHA02518 (ParA-like protein; Provisional)