myRT

myRT report for GCA_000684235.1_Stap_aure_VET0078R_V1

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Seq: JIUJ01000023.1 (29788 bp)
Overview 1 RT 1: 20251-29304 bp Neighborhood of RT #1 [20251, 29788] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 20251-20802 bp Feature: gene Location: 20852-26293 bp Feature: domain Description: N6_Mtase Location: 22844-23435 bp Feature: domain Description: N6_Mtase Location: 22844-23435 bp Feature: domain Description: COG4646 Location: 24026-26150 bp Feature: domain Description: COG4646 Location: 24026-261 50 bp Feature: gene Location: 26791-28569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27052-27844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27052-27844 bp Feature: domain Description: Intron_maturas2 Location: 27949-28180 bp Feature: domain Description: Intron_maturas2 Location: 27949-281 80 bp Feature: domain Description: HNHc Note: nucleases Location: 28345-28531 bp Feature: domain Description: HNHc Note: nucleases Location: 28345-28531 bp Feature: gene Location: 28707-29788 bp Feature: domain Description: KOG1000 Location: 28986-29304 bp Feature: domain Description: KOG1 000 Location: 28986-29304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )