myRT

myRT report for GCA_000685095.1_ASM68509v1

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Seq: BAYE01000039.1 Burkholderia caledonica NBRC 102488 DNA, contig: BCA01S_CON03501, whole genome shotgun sequence (33411 bp)
Overview 1 RT 1: 17770-23653 bp Neighborhood of RT #1 [17770, 23658] PBP1_ABC_LIVBP_like DapA RVT-GII Phasin_2 AcAcCoA_reduct Feature: gene Location: 17770-18921 bp Feature: domain Description: PBP1_ABC_LIVBP_like Location: 17869-18877 bp Feature: domain Description: PBP1 _ABC_LIVBP_like Location: 1 7869-1 8877 bp Feature: gene Location: 19232-20176 bp Feature: domain Description: DapA Location: 19244-20117 bp Feature: domain Description: DapA Location: 1 9244-201 1 7 bp Feature: gene Location: 20347-21483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20872-21292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20872-21 292 bp Feature: gene Location: 22101-22664 bp Feature: domain Description: Phasin_2 Location: 22122-22407 bp Feature: domain Description: Phasin_2 Location: 221 22-22407 bp Feature: gene Location: 22789-23658 bp Feature: domain Description: AcAcCoA_reduct Location: 22927-23653 bp Feature: domain Description: AcAcCoA_reduct Location: 22927-23653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP1_ABC_LIVBP_like, DapA (COG0329), RVT-GII, Phasin_2 (pfam09361), AcAcCoA_reduct (TIGR01829)

Seq: BAYE01000036.1 Burkholderia caledonica NBRC 102488 DNA, contig: BCA01S_CON03201, whole genome shotgun sequence (42790 bp)
Overview 1 RT 1: 25101-30658 bp Neighborhood of RT #1 [25101, 30658] RVT_N RVT-GII PRK05658 Feature: gene Location: 25101-25304 bp Feature: gene Location: 25495-25776 bp Feature: gene Location: 26224-27291 bp Feature: RT Description: RVT_N Location: 26443-26686 bp Feature: RT Description: RVT_N Location: 2 6443-2 6686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26731-27271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6731-2 72 71 bp Feature: gene Location: 27951-30029 bp Feature: domain Description: PRK05658 Location: 28164-30024 bp Feature: domain Description: PRK05658 Location: 2 8164-3002 4 bp Feature: gene Location: 30212-30658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: BAYE01000035.1 Burkholderia caledonica NBRC 102488 DNA, contig: BCA01S_CON03101, whole genome shotgun sequence (48126 bp)
Overview 1 RT 1: 22685-27359 bp Neighborhood of RT #1 [22685, 27403] SnoaL_2 Cupin_6 AraC RVT-GII GIIM PRK10337 Feature: gene Location: 22685-23041 bp Feature: domain Description: SnoaL_2 Location: 22739-23015 bp Feature: domain Description: SnoaL_2 Location: 2273 9-23 015 bp Feature: gene Location: 23127-24095 bp Feature: domain Description: Cupin_6 Location: 23172-23709 bp Feature: domain Description: Cupin_6 Location: 23 172-23 709 bp Feature: domain Description: AraC Location: 23748-24072 bp Feature: domain Description: AraC Location: 23 748-24072 bp Feature: gene Location: 24508-25818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24799-25462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24799-25462 bp Feature: domain Description: GIIM Note: maturase Location: 25531-25747 bp Feature: domain Description: GIIM Note: maturase Location: 2553 1-25747 bp Feature: gene Location: 26153-26374 bp Feature: gene Location: 26459-27403 bp Feature: domain Description: PRK10337 Location: 26570-27359 bp Feature: domain Description: PRK103 3 7 Location: 26570-273 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_2 (pfam12680), Cupin_6 (pfam12852), AraC (COG2207), RVT-GII, GIIM (pfam08388), PRK10337 (sensor protein QseC; Provisional)