myRT

myRT report for GCA_000686925.1_ASM68692v1

Download annotations/find similar RTs

Seq: KK366039.1 Halomonas sp. HL-48 genomic scaffold CY41DRAFT_scaffold00001.1, whole genome shotgun sequence (3740234 bp)
Overview 1 RT 1: 657318-661404 bp 2 RT 2: 2276004-2280854 bp 3 RT 3: 3545705-3549446 bp Neighborhood of RT #1 [657318, 661404] HsdM RVT-Retrons HipB Neighborhood of RT #2 [2276004, 2280910] COG5340 RutR RVT-GII GIIM ALDH_F6_MMSDH Neighborhood of RT #3 [3545705, 3549577] CspC RVT-GII GIIM Abhydrolase_2 PRK07375 Feature: gene Location: 657318-658877 bp Feature: domain Description: HsdM Location: 657342-658842 bp Feature: domain Description: HsdM Location: 657342-658842 bp Feature: gene Location: 659114-659281 bp Feature: gene Location: 659647-660639 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 659797-660370 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 659797-660370 bp Feature: gene Location: 660639-660926 bp Feature: domain Description: HipB Location: 660648-660885 bp Feature: domain Description: HipB Location: 660648-660885 bp Feature: gene Location: 660970-661404 bp Feature: gene Location: 2276004-2276546 bp Feature: domain Description: COG5340 Location: 2276013-2276349 bp Feature: domain Description: COG5340 Location: 227601 3-2276349 bp Feature: gene Location: 2276615-2277301 bp Feature: domain Description: RutR Location: 2276714-2277287 bp Feature: domain Description: RutR Location: 227671 4-2277287 bp Feature: gene Location: 2277349-2278626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2277562-2278183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2277562-22781 83 bp Feature: domain Description: GIIM Note: maturase Location: 2278225-2278453 bp Feature: domain Description: GIIM Note: maturase Location: 2278225-2278453 bp Feature: gene Location: 2278644-2279045 bp Feature: gene Location: 2279414-2280910 bp Feature: domain Description: ALDH_F6_MMSDH Location: 2279429-2280854 bp Feature: domain Description: ALDH_F6_MMSDH Location: 2279429-2280854 bp Feature: gene Location: 3545705-3545908 bp Feature: domain Description: CspC Location: 3545708-3545903 bp Feature: domain Description: CspC Location: 3545708-3545903 bp Feature: gene Location: 3546292-3546693 bp Feature: gene Location: 3546711-3547988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3546924-3547545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3546924-3547545 bp Feature: domain Description: GIIM Note: maturase Location: 3547587-3547815 bp Feature: domain Description: GIIM Note: maturase Location: 3547587-354781 5 bp Feature: gene Location: 3548145-3548816 bp Feature: domain Description: Abhydrolase_2 Location: 3548190-3548796 bp Feature: domain Description: Abhydrolase_2 Location: 35481 90-3548796 bp Feature: gene Location: 3548897-3549577 bp Feature: domain Description: PRK07375 Location: 3549299-3549446 bp Feature: domain Description: PRK07375 Location: 3549299-3549446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-Retrons, HipB (COG1396), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RutR (TIGR03613), RVT-GII, GIIM (pfam08388), ALDH_F6_MMSDH (cd07085), CspC (COG1278), Abhydrolase_2 (pfam02230)
PRK07375 (Na+/H+ antiporter subunit C)