myRT

myRT report for GCA_000687025.1_ASM68702v1

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Seq: JMGU01000195.1 (4011 bp)
Overview 1 RT 1: 1589-3241 bp Neighborhood of RT #1 [1589, 3465] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 1589-1981 bp Ori: KDA76497.1 Feature: domain Description: InsE Location: 1610-1958 bp Feature: domain Description: InsE Location: 1 61 0-1 958 bp Feature: gene Location: 2069-2515 bp Ori: KDA76498.1 Feature: domain Description: PHA02517 Location: 2072-2513 bp Feature: domain Description: PHA0251 7 Location: 2072-251 3 bp Feature: gene Location: 2632-3465 bp Ori: KDA76495.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2638-2947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2638-2947 bp Feature: domain Description: GIIM Note: maturase Location: 3022-3241 bp Feature: domain Description: GIIM Note: maturase Location: 3022-3241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JMGU01000050.1 (15817 bp)
Overview 1 RT 1: 547-2714 bp 2 RT 2: 12960-15047 bp Neighborhood of RT #1 [547, 2974] RVT-GII GIIM PHA02517 Tra5 Neighborhood of RT #2 [12960, 15271] DDE_Tnp_IS66 PHA02517 RVT-GII GIIM Feature: gene Location: 547-1380 bp Ori: KDA79469.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-862 bp Feature: domain Description: GIIM Note: maturase Location: 937-1156 bp Feature: domain Description: GIIM Note: maturase Location: 937-1156 bp Feature: gene Location: 1497-1943 bp Ori: KDA79470.1 Feature: domain Description: PHA02517 Location: 1500-1941 bp Feature: domain Description: PHA02 517 Location: 1500-1941 bp Feature: gene Location: 1988-2974 bp Ori: KDA79471.1 Feature: domain Description: Tra5 Location: 2213-2714 bp Feature: domain Description: Tra5 Location: 2 2 13-2 714 bp Feature: gene Location: 12960-13835 bp Ori: KDA79483.1 Feature: domain Description: DDE_Tnp_IS66 Location: 12963-13800 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12 963-13800 bp Feature: gene Location: 13875-14321 bp Ori: KDA79484.1 Feature: domain Description: PHA02517 Location: 13878-14319 bp Feature: domain Description: PHA02 517 Location: 13878-14319 bp Feature: gene Location: 14438-15271 bp Ori: KDA79485.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14444-14753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14444-14753 bp Feature: domain Description: GIIM Note: maturase Location: 14828-15047 bp Feature: domain Description: GIIM Note: maturase Location: 1482 8-15047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Tra5 (COG2801), DDE_Tnp_IS66 (pfam03050)

Seq: JMGU01000184.1 (1910 bp)
Overview 1 RT 1: 1-1906 bp Neighborhood of RT #1 [1, 1910] RVT-GII GIIM PHA02517 Feature: gene Location: 1-123 bp Feature: gene Location: 845-1678 bp Ori: KDA76542.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1160 bp Feature: domain Description: GIIM Note: maturase Location: 1235-1454 bp Feature: domain Description: GIIM Note: maturase Location: 123 5-1454 bp Feature: gene Location: 1795-1910 bp Ori: KDA76540.1 Gene: ipaH Feature: domain Description: PHA02517 Location: 1798-1906 bp Feature: domain Description: PHA02517 Location: 1798-1906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JMGU01000188.1 (11511 bp)
Overview 1 RT 1: 9093-10741 bp Neighborhood of RT #1 [9093, 10965] PHA02517 RVT-GII GIIM Feature: gene Location: 9093-9290 bp Feature: gene Location: 9569-10015 bp Ori: KDA76532.1 Feature: domain Description: PHA02517 Location: 9572-10013 bp Feature: domain Description: PHA02517 Location: 9572-10013 bp Feature: gene Location: 10132-10965 bp Ori: KDA76527.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10138-10447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10138-104 4 7 bp Feature: domain Description: GIIM Note: maturase Location: 10522-10741 bp Feature: domain Description: GIIM Note: maturase Location: 10522-1074 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JMGU01000185.1 (1801 bp)
Overview 1 RT 1: 547-1800 bp Neighborhood of RT #1 [547, 1801] RVT-GII GIIM PHA02517 Feature: gene Location: 547-1380 bp Ori: KDA76538.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 5 3-862 bp Feature: domain Description: GIIM Note: maturase Location: 937-1156 bp Feature: domain Description: GIIM Note: maturase Location: 937-115 6 bp Feature: gene Location: 1497-1801 bp Ori: KDA76539.1 Feature: domain Description: PHA02517 Location: 1500-1800 bp Feature: domain Description: PHA025 17 Location: 15 00-1800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JMGU01000051.1 (3308 bp)
Overview 1 RT 1: 547-3031 bp Neighborhood of RT #1 [547, 3054] RVT-GII GIIM PHA02517 DDE_Tnp_IS66_C Feature: gene Location: 547-1380 bp Ori: KDA79465.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-86 2 bp Feature: domain Description: GIIM Note: maturase Location: 937-1156 bp Feature: domain Description: GIIM Note: maturase Location: 937-1156 bp Feature: gene Location: 1497-1943 bp Ori: KDA79466.1 Feature: domain Description: PHA02517 Location: 1500-1941 bp Feature: domain Description: PHA02517 Location: 1500-1941 bp Feature: gene Location: 2869-3054 bp Ori: KDA79467.1 Feature: domain Description: DDE_Tnp_IS66_C Location: 2923-3031 bp Feature: domain Description: DDE_Tnp_IS6 6 _C Location: 2923-3031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66_C (pfam13817)

Seq: JMGU01000022.1 (5715 bp)
Overview 1 RT 1: 238-3059 bp Neighborhood of RT #1 [238, 3391] DDE_Tnp_IS1 InsE RVT-GII GIIM COG4584 Feature: gene Location: 238-480 bp Ori: KDA80568.1 Feature: domain Description: DDE_Tnp_IS1 Location: 244-445 bp Feature: domain Description: DDE_Tnp_IS1 Location: 244-445 bp Feature: gene Location: 666-806 bp Ori: KDA80569.1 Feature: domain Description: InsE Location: 687-801 bp Feature: domain Description: InsE Location: 687 -801 bp Feature: gene Location: 1214-2545 bp Ori: KDA80570.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1544-2162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1544-2162 bp Feature: domain Description: GIIM Note: maturase Location: 2210-2441 bp Feature: domain Description: GIIM Note: maturase Location: 2210-2441 bp Feature: gene Location: 2567-2704 bp Feature: gene Location: 2750-3391 bp Ori: KDA80572.1 Feature: domain Description: COG4584 Location: 2759-3059 bp Feature: domain Description: COG4584 Location: 27 59-3059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsE (COG2963), RVT-GII, GIIM (pfam08388), COG4584 (Transposase )

Seq: JMGU01000246.1 (4535 bp)
Overview 1 RT 1: 547-2110 bp Neighborhood of RT #1 [547, 2110] RVT-GII GIIM PHA02517 Feature: gene Location: 547-1380 bp Ori: KDA76138.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-8 62 bp Feature: domain Description: GIIM Note: maturase Location: 937-1156 bp Feature: domain Description: GIIM Note: maturase Location: 937-1156 bp Feature: gene Location: 1497-1943 bp Ori: KDA76134.1 Feature: domain Description: PHA02517 Location: 1500-1941 bp Feature: domain Description: PHA02517 Location: 1500-1941 bp Feature: gene Location: 1946-2110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)