myRT

myRT report for GCA_000687085.1_ASM68708v1

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Seq: JMGR01000074.1 (77439 bp)
Overview 1 RT 1: 51370-55252 bp Neighborhood of RT #1 [51370, 55257] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51370-51828 bp Feature: domain Description: dut Location: 51376-51823 bp Feature: domain Description: dut Location: 51 376-51 823 bp Feature: gene Location: 51935-52531 bp Feature: domain Description: slmA Location: 51941-52517 bp Feature: domain Description: slmA Location: 51 941 -5251 7 bp Feature: gene Location: 52577-53536 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52712-53261 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5271 2-53261 bp Feature: gene Location: 53834-54475 bp Feature: domain Description: pyrE Location: 53837-54470 bp Feature: domain Description: pyrE Location: 53837-54470 bp Feature: gene Location: 54541-55257 bp Feature: domain Description: rph Location: 54544-55252 bp Feature: domain Description: rph Location: 54544-55252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JMGR01000104.1 (6823 bp)
Overview 1 RT 1: 4493-6602 bp Neighborhood of RT #1 [4493, 6823] PHA02517 RVT-GII GIIM Feature: gene Location: 4493-4732 bp Feature: domain Description: PHA02517 Location: 4496-4667 bp Feature: domain Description: PHA02 517 Location: 4496-4667 bp Feature: gene Location: 5029-5142 bp Feature: gene Location: 5339-6823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5597-6329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5597-632 9 bp Feature: domain Description: GIIM Note: maturase Location: 6404-6602 bp Feature: domain Description: GIIM Note: maturase Location: 6404-6602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JMGR01000019.1 (151289 bp)
Overview 1 RT 1: 362-3857 bp Neighborhood of RT #1 [362, 3871] RVT-GII GIIM PHA02517 PRK15092 Feature: gene Location: 362-475 bp Feature: gene Location: 672-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Feature: gene Location: 2298-2744 bp Feature: domain Description: PHA02517 Location: 2301-2742 bp Feature: domain Description: PHA02517 Location: 23 01-2742 bp Feature: gene Location: 2996-3871 bp Feature: domain Description: PRK15092 Location: 2999-3857 bp Feature: domain Description: PRK15092 Location: 2999-3 857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), PRK15092 (DNA-binding transcriptional repressor LrhA; Provisional), RVT-GII, GIIM (pfam08388)

Seq: JMGR01000016.1 (11663 bp)
Overview 1 RT 1: 8576-11302 bp Neighborhood of RT #1 [8576, 11302] PHA02517 RVT-GII GIIM Feature: gene Location: 8576-8719 bp Feature: gene Location: 9155-9331 bp Feature: domain Description: PHA02517 Location: 9158-9260 bp Feature: domain Description: PHA02517 Location: 9158-9260 bp Feature: gene Location: 9484-10992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9742-10474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 974 2-104 74 bp Feature: domain Description: GIIM Note: maturase Location: 10549-10747 bp Feature: domain Description: GIIM Note: maturase Location: 1054 9-1074 7 bp Feature: gene Location: 11189-11302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JMGR01000130.1 (7986 bp)
Overview 1 RT 1: 1-2506 bp Neighborhood of RT #1 [1, 2571] RVT-GII GIIM PHA02517 Feature: gene Location: 1-1485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 9-991 bp Feature: domain Description: GIIM Note: maturase Location: 1066-1264 bp Feature: domain Description: GIIM Note: maturase Location: 1066-1264 bp Feature: gene Location: 1682-1795 bp Feature: gene Location: 2092-2571 bp Feature: domain Description: PHA02517 Location: 2152-2506 bp Feature: domain Description: PHA025 17 Location: 215 2-25 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JMGR01000147.1 (3089 bp)
Overview 1 RT 1: 1-2506 bp Neighborhood of RT #1 [1, 2571] RVT-GII GIIM PHA02517 Feature: gene Location: 1-1485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-991 bp Feature: domain Description: GIIM Note: maturase Location: 1066-1264 bp Feature: domain Description: GIIM Note: maturase Location: 106 6 -126 4 bp Feature: gene Location: 1682-1795 bp Feature: gene Location: 2092-2571 bp Feature: domain Description: PHA02517 Location: 2152-2506 bp Feature: domain Description: PHA02517 Location: 2152-2506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)