myRT

myRT report for GCA_000687125.1_ASM68712v1

Download annotations/find similar RTs

Seq: JMGQ01000114.1 (171582 bp)
Overview 1 RT 1: 112068-115946 bp Neighborhood of RT #1 [112068, 115951] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 112068-112526 bp Ori: KDA56007.1 Gene: dut Feature: domain Description: dut Location: 112074-112521 bp Feature: domain Description: dut Location: 1 1 2074-1 1 2521 bp Feature: gene Location: 112632-113228 bp Ori: KDA56008.1 Gene: slmA Feature: domain Description: slmA Location: 112638-113214 bp Feature: domain Description: slmA Location: 1 1 2638-1 1 321 4 bp Feature: gene Location: 113272-114231 bp Ori: KDA56009.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 113407-113956 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 3407-1 1 3956 bp Feature: gene Location: 114528-115169 bp Ori: KDA56010.1 Gene: pyrE Feature: domain Description: pyrE Location: 114531-115164 bp Feature: domain Description: pyrE Location: 1 1 4531 -1 1 51 64 bp Feature: gene Location: 115235-115951 bp Ori: KDA56011.1 Gene: rph Feature: domain Description: rph Location: 115238-115946 bp Feature: domain Description: rph Location: 1 1 5238-1 1 5946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JMGQ01000123.1 (230522 bp)
Overview 1 RT 1: 158633-164120 bp Neighborhood of RT #1 [158633, 164120] PRK13889 RVT-Retrons Feature: gene Location: 158633-159364 bp Feature: gene Location: 160690-162192 bp Ori: KDA55305.1 Feature: domain Description: PRK13889 Location: 160693-161275 bp Feature: domain Description: PRK13889 Location: 160693-1612 75 bp Feature: gene Location: 162269-163369 bp Ori: KDA55306.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 162410-162962 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 162 410-162 962 bp Feature: gene Location: 163734-163949 bp Feature: gene Location: 163959-164120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons

Seq: JMGQ01000061.1 (146409 bp)
Overview 1 RT 1: 15949-21981 bp Neighborhood of RT #1 [15949, 22118] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 15949-16089 bp Ori: KDA59692.1 Feature: domain Description: SfsB Location: 15958-16030 bp Feature: domain Description: SfsB Location: 15958-1603 0 bp Feature: gene Location: 16086-16556 bp Feature: gene Location: 16903-20112 bp Ori: KDA59694.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 17431-17920 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1743 1-17920 bp Feature: domain Description: nitrilase Location: 19426-20023 bp Feature: domain Description: nitrilase Location: 19426-20023 bp Feature: gene Location: 20429-21211 bp Ori: KDA59695.1 Feature: domain Description: AbiEi_3_N Location: 20441-20702 bp Feature: domain Description: AbiEi_3 _N Location: 20441-20702 bp Feature: domain Description: AbiEi_3 Location: 20714-21170 bp Feature: domain Description: AbiEi_3 Location: 20714-21170 bp Feature: gene Location: 21198-22118 bp Ori: KDA59696.1 Feature: domain Description: AbiEii Location: 21240-21981 bp Feature: domain Description: AbiEii Location: 21240-21981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)