myRT

myRT report for GCA_000687555.1_ASM68755v1

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Seq: JHWJ01000001.1 [Clostridium] aerotolerans DSM 5434 T546DRAFT_scaffold00001.1_C, whole genome shotgun sequence (596150 bp)
Overview 1 RT 1: 419889-426041 bp Neighborhood of RT #1 [419889, 426085] PRK06545 PRK08673 RVT-Retrons COG5263 PRK12740 Feature: gene Location: 419889-420986 bp Feature: domain Description: PRK06545 Location: 419904-420960 bp Feature: domain Description: PRK06545 Location: 41 9904-420960 bp Feature: gene Location: 420983-421999 bp Feature: domain Description: PRK08673 Location: 420989-421985 bp Feature: domain Description: PRK08673 Location: 420989-421 985 bp Feature: gene Location: 422411-423409 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 422573-423125 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 422573-4231 25 bp Feature: gene Location: 423435-423827 bp Feature: domain Description: COG5263 Location: 423552-423810 bp Feature: domain Description: COG5263 Location: 423552-42381 0 bp Feature: gene Location: 423983-426085 bp Feature: domain Description: PRK12740 Location: 424028-426041 bp Feature: domain Description: PRK1 2740 Location: 424028-426041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06545 (prephenate dehydrogenase; Validated), PRK08673 (3-deoxy-7-phosphoheptulonate synthase; Reviewed), RVT-Retrons, COG5263 (Glucan-binding domain (YG repeat) ), PRK12740 (elongation factor G-like protein EF-G2)

Seq: JHWJ01000014.1 [Clostridium] aerotolerans DSM 5434 T546DRAFT_scaffold00014.14_C, whole genome shotgun sequence (156112 bp)
Overview 1 RT 1: 70329-76323 bp Neighborhood of RT #1 [70329, 76637] Wzy_C RVT-GII GIIM RVT-GII COG5263 COG5263 CW_binding_1 CW_binding_1 COG5263 Feature: gene Location: 70329-71909 bp Feature: domain Description: Wzy_C Location: 71037-71724 bp Feature: domain Description: Wzy_C Location: 71037-7172 4 bp Feature: gene Location: 72656-72823 bp Feature: gene Location: 73128-73568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73137-73230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73137-732 30 bp Feature: domain Description: GIIM Note: maturase Location: 73290-73476 bp Feature: domain Description: GIIM Note: maturase Location: 732 90-73476 bp Feature: gene Location: 73902-74252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74076-74211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74076-742 11 bp Feature: gene Location: 74295-74462 bp Feature: gene Location: 74838-76637 bp Feature: domain Description: COG5263 Location: 74991-75216 bp Feature: domain Description: COG52 63 Location: 74991-752 16 bp Feature: domain Description: COG5263 Location: 75258-75501 bp Feature: domain Description: COG52 63 Location: 752 58-75501 bp Feature: domain Description: CW_binding_1 Location: 75594-75618 bp Feature: domain Description: CW_binding_1 Location: 75594-75618 bp Feature: domain Description: CW_binding_1 Location: 75867-75906 bp Feature: domain Description: CW_binding_1 Location: 75867-75906 bp Feature: domain Description: COG5263 Location: 76119-76323 bp Feature: domain Description: COG52 63 Location: 76119-7632 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Wzy_C (pfam04932), RVT-GII, GIIM (pfam08388), COG5263 (Glucan-binding domain (YG repeat) ), CW_binding_1 (pfam01473)

Seq: JHWJ01000021.1 [Clostridium] aerotolerans DSM 5434 T546DRAFT_scaffold00021.21_C, whole genome shotgun sequence (59728 bp)
Overview 1 RT 1: 45538-53913 bp Neighborhood of RT #1 [45538, 53913] COG0610 DUF45 RVT-UG5 nitrilase HNH Feature: gene Location: 45538-48669 bp Feature: domain Description: COG0610 Location: 45559-48400 bp Feature: domain Description: COG0610 Location: 45559-48400 bp Feature: gene Location: 48669-49376 bp Feature: domain Description: DUF45 Location: 48732-49353 bp Feature: domain Description: DUF45 Location: 4873 2-493 53 bp Feature: gene Location: 49388-52348 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 49874-50387 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 49874-503 87 bp Feature: domain Description: nitrilase Location: 51548-52193 bp Feature: domain Description: nitrilase Location: 51548-52193 bp Feature: gene Location: 52607-53296 bp Feature: domain Description: HNH Note: nucleases Location: 53090-53240 bp Feature: domain Description: HNH Note: nucleases Location: 53 090-53 240 bp Feature: gene Location: 53317-53913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863), RVT-UG5, nitrilase (cl11424), HNH (pfam01844)