myRT

myRT report for GCA_000688035.1_ASM68803v1

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Seq: JIAE01000001.1 Ruminococcaceae bacterium AE2021 P151DRAFT_scf7180000000002_quiver_dupTrim_8886.1_C, whole genome shotgun sequence (3083950 bp)
Overview 1 RT 1: 620012-624911 bp 2 RT 2: 1233805-1238905 bp 3 RT 3: 2197435-2201660 bp Neighborhood of RT #1 [620012, 624949] NTP_transferase RVT-GII GIIM LicC PhnW-AepZ Neighborhood of RT #2 [1233805, 1238907] PRK00885 nadD RVT-UG26 RsfS ComEA Neighborhood of RT #3 [2197435, 2201677] HTH_XRE DUF1295 RVT-GII GIIM SUFU Feature: gene Location: 620012-620971 bp Feature: domain Description: NTP_transferase Location: 620096-620879 bp Feature: domain Description: NTP_transferase Location: 620096-620879 bp Feature: gene Location: 621211-621417 bp Feature: gene Location: 621531-622814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 621735-622350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 621 735-622350 bp Feature: domain Description: GIIM Note: maturase Location: 622410-622641 bp Feature: domain Description: GIIM Note: maturase Location: 62241 0-622641 bp Feature: gene Location: 622948-623805 bp Feature: domain Description: LicC Location: 623119-623794 bp Feature: domain Description: LicC Location: 6231 1 9-623794 bp Feature: gene Location: 623819-624949 bp Feature: domain Description: PhnW-AepZ Location: 623843-624911 bp Feature: domain Description: PhnW-AepZ Location: 623843-62491 1 bp Feature: gene Location: 1233805-1235085 bp Feature: domain Description: PRK00885 Location: 1233808-1235074 bp Feature: domain Description: PRK00885 Location: 1 233808-1 235074 bp Feature: gene Location: 1235082-1236311 bp Feature: domain Description: nadD Location: 1235085-1236228 bp Feature: domain Description: nadD Location: 1 235085-1 236228 bp Feature: gene Location: 1236404-1237690 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1236674-1237292 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1 236674-1 237292 bp Feature: gene Location: 1237737-1238075 bp Feature: domain Description: RsfS Location: 1237740-1238064 bp Feature: domain Description: RsfS Location: 1 237740-1 238064 bp Feature: gene Location: 1238002-1238907 bp Feature: domain Description: ComEA Location: 1238410-1238905 bp Feature: domain Description: ComEA Location: 1 23841 0-1 238905 bp Feature: gene Location: 2197435-2198031 bp Feature: domain Description: HTH_XRE Location: 2197456-2197627 bp Feature: domain Description: HTH_XRE Location: 21 97456-21 97627 bp Feature: gene Location: 2198318-2199112 bp Feature: domain Description: DUF1295 Location: 2198408-2199050 bp Feature: domain Description: DUF1 295 Location: 21 98408-21 99050 bp Feature: gene Location: 2199178-2200461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2199382-2199997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 99382-21 99997 bp Feature: domain Description: GIIM Note: maturase Location: 2200057-2200288 bp Feature: domain Description: GIIM Note: maturase Location: 2200057-2200288 bp Feature: gene Location: 2200623-2200967 bp Feature: gene Location: 2201018-2201677 bp Feature: domain Description: SUFU Location: 2201171-2201660 bp Feature: domain Description: SUFU Location: 2201 1 71 -2201 660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase (pfam00483), RVT-GII, GIIM (pfam08388), LicC (COG4750), PhnW-AepZ (TIGR03301), PRK00885 (phosphoribosylamine--glycine ligase; Provisional), nadD (PRK07152), RVT-UG26, RsfS (pfam02410), ComEA (COG1555)
HTH_XRE (smart00530), DUF1295 (pfam06966), SUFU (pfam05076)