myRT

myRT report for GCA_000688115.1_ASM68811v1

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Seq: JIBH01000001.1 Polaromonas sp. EUR3 1.2.1 K216DRAFT_scf7180000000006_quiver.1_C, whole genome shotgun sequence (4378807 bp)
Overview 1 RT 1: 108426-111870 bp 2 RT 2: 1136171-1139836 bp 3 RT 3: 1711040-1714551 bp Neighborhood of RT #1 [108426, 111887] rpsQ RVT-GII GIIM AHP1 KOG3139 Neighborhood of RT #2 [1136171, 1139836] TauA Rve RVT-GII Neighborhood of RT #3 [1711040, 1714556] PRK08199 RVT-GII GIIM PRK14724 Feature: gene Location: 108426-108695 bp Feature: domain Description: rpsQ Location: 108444-108684 bp Feature: domain Description: rpsQ Location: 1 08444-1 08684 bp Feature: gene Location: 108733-108945 bp Feature: gene Location: 109145-110524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109490-110105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 09490-1 1 01 05 bp Feature: domain Description: GIIM Note: maturase Location: 110162-110366 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 01 62-1 1 0366 bp Feature: gene Location: 110741-111247 bp Feature: domain Description: AHP1 Location: 110744-111236 bp Feature: domain Description: AHP1 Location: 1 1 0744-1 1 1 236 bp Feature: gene Location: 111399-111887 bp Feature: domain Description: KOG3139 Location: 111471-111870 bp Feature: domain Description: KOG31 39 Location: 1 1 1 471 -1 1 1 870 bp Feature: gene Location: 1136171-1137169 bp Feature: domain Description: TauA Location: 1136198-1136969 bp Feature: domain Description: TauA Location: 1 1 361 98-1 1 36969 bp Feature: gene Location: 1137366-1137617 bp Feature: domain Description: Rve Location: 1137390-1137525 bp Feature: domain Description: Rve Location: 1 1 37390-1 1 37525 bp Feature: gene Location: 1137743-1138021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1137839-1137968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 37839-1 1 37968 bp Feature: gene Location: 1138119-1138259 bp Feature: gene Location: 1138460-1139836 bp Feature: gene Location: 1711040-1712734 bp Feature: domain Description: PRK08199 Location: 1711049-1712717 bp Feature: domain Description: PRK081 99 Location: 1 71 1 049-1 71 271 7 bp Feature: gene Location: 1712784-1712945 bp Feature: gene Location: 1713218-1713832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1713269-1713413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 3269-1 71 341 3 bp Feature: domain Description: GIIM Note: maturase Location: 1713470-1713674 bp Feature: domain Description: GIIM Note: maturase Location: 1 71 3470-1 71 3674 bp Feature: gene Location: 1713901-1714047 bp Feature: gene Location: 1714095-1714556 bp Feature: domain Description: PRK14724 Location: 1714125-1714551 bp Feature: domain Description: PRK1 4724 Location: 1 71 41 25-1 71 4551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsQ (PRK05610), RVT-GII, GIIM (pfam08388), AHP1 (COG0678), KOG3139 (KOG3139, N-acetyltransferase ), TauA (COG4521), Rve (COG3316), PRK08199 (thiamine pyrophosphate protein; Validated), PRK14724 (DNA topoisomerase III; Provisional)