myRT

myRT report for GCA_000688155.1_Kleb_pneu_MGH_63_V1

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Seq: JJNB01000016.1 (125429 bp)
Overview 1 RT 1: 353-3601 bp Neighborhood of RT #1 [353, 3603] RVT-GII PRK10276 umuC Feature: gene Location: 353-1837 bp Ori: EZQ79128.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 755-1445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 755-1 445 bp Feature: gene Location: 1916-2335 bp Ori: EZQ79129.1 Feature: domain Description: PRK10276 Location: 1919-2330 bp Feature: domain Description: PRK1 0276 Location: 1 91 9-2330 bp Feature: gene Location: 2338-3603 bp Ori: EZQ79130.1 Feature: domain Description: umuC Location: 2341-3601 bp Feature: domain Description: umuC Location: 2341 -3601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: JJNB01000004.1 (225828 bp)
Overview 1 RT 1: 64463-73403 bp Neighborhood of RT #1 [64463, 74482] FimC FimD RVT-UG4 PRK09692 DUF1176 Feature: gene Location: 64463-65227 bp Ori: EZQ82503.1 Feature: domain Description: FimC Location: 64508-65210 bp Feature: domain Description: FimC Location: 64508-652 10 bp Feature: gene Location: 65274-67868 bp Ori: EZQ82504.1 Feature: domain Description: FimD Location: 65316-67857 bp Feature: domain Description: FimD Location: 65316-67857 bp Feature: gene Location: 67865-69946 bp Ori: EZQ82505.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 68276-68720 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 682 76-6872 0 bp Feature: gene Location: 70704-71567 bp Ori: EZQ82506.1 Feature: domain Description: PRK09692 Location: 70728-71565 bp Feature: domain Description: PRK09692 Location: 7072 8-71565 bp Feature: gene Location: 72395-74482 bp Ori: EZQ82507.1 Feature: domain Description: DUF1176 Location: 72476-73403 bp Feature: domain Description: DUF1176 Location: 72 476-73403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, PRK09692 (Integrase; provisional), DUF1176 (pfam06674)