myRT

myRT report for GCA_000688175.1_Kleb_pneu_UCI_64_V1

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Seq: JJNI01000119.1 (2463 bp)
Overview 1 RT 1: 462-2462 bp Neighborhood of RT #1 [462, 2463] RVT-GII StbA Feature: gene Location: 462-1946 bp Ori: EZR02878.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1 554 bp Feature: gene Location: 2195-2463 bp Ori: EZR02879.1 Feature: domain Description: StbA Location: 2198-2462 bp Feature: domain Description: StbA Location: 21 98-2462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, StbA (pfam06406)

Seq: JJNI01000042.1 (38257 bp)
Overview 1 RT 1: 30083-34571 bp Neighborhood of RT #1 [30083, 34735] PRK09692 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 30083-30505 bp Ori: EZR11771.1 Feature: domain Description: PRK09692 Location: 30086-30467 bp Feature: domain Description: PRK09692 Location: 30086-30467 bp Feature: gene Location: 30507-31148 bp Feature: gene Location: 31574-32539 bp Ori: EZR11773.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31682-32279 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31682 -32 2 79 bp Feature: gene Location: 32517-34109 bp Ori: EZR11774.1 Feature: domain Description: COG3950 Location: 32697-33918 bp Feature: domain Description: COG3950 Location: 32 697-33918 bp Feature: gene Location: 34106-34735 bp Ori: EZR11775.1 Feature: domain Description: TIGR02646 Location: 34196-34571 bp Feature: domain Description: TIGR02 646 Location: 34196-34571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: JJNI01000043.1 (36905 bp)
Overview 1 RT 1: 26692-32236 bp Neighborhood of RT #1 [26692, 32274] Dcm Dcm RVT-GII DUF1367 RecA_dep_nuc Feature: gene Location: 26692-28653 bp Ori: EZR11468.1 Feature: domain Description: Dcm Location: 26713-27589 bp Feature: domain Description: Dcm Location: 26713 -27589 bp Feature: domain Description: Dcm Location: 28459-28615 bp Feature: domain Description: Dcm Location: 28459-28615 bp Feature: gene Location: 28653-28991 bp Feature: gene Location: 29521-31029 bp Ori: EZR11470.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29923-30637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29923 -3 063 7 bp Feature: gene Location: 31368-31961 bp Ori: EZR11471.1 Feature: domain Description: DUF1367 Location: 31371-31953 bp Feature: domain Description: DUF13 67 Location: 3 13 71-3 1953 bp Feature: gene Location: 31972-32274 bp Ori: EZR11472.1 Feature: domain Description: RecA_dep_nuc Location: 31978-32236 bp Feature: domain Description: RecA_dep_nuc Location: 3 1978-3 223 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), RVT-GII, DUF1367 (pfam07105), RecA_dep_nuc (pfam16786)

Seq: JJNI01000020.1 (95324 bp)
Overview 1 RT 1: 53398-58369 bp Neighborhood of RT #1 [53398, 58374] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu PRK00872 Feature: gene Location: 53398-54192 bp Ori: EZR17351.1 Feature: domain Description: PRK09692 Location: 53407-53770 bp Feature: domain Description: PRK09692 Location: 534 07-53770 bp Feature: domain Description: PRK09692 Location: 53788-54163 bp Feature: domain Description: PRK09692 Location: 53788-54 163 bp Feature: gene Location: 54424-55065 bp Ori: EZR17352.1 Feature: domain Description: SLATT_5 Location: 54427-55030 bp Feature: domain Description: SLATT_5 Location: 54 4 27-55030 bp Feature: gene Location: 55260-56669 bp Ori: EZR17353.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 55497-56109 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 554 97-56109 bp Feature: gene Location: 57366-57545 bp Ori: EZR17354.1 Feature: domain Description: Psu Location: 57384-57543 bp Feature: domain Description: Psu Location: 57384 -5754 3 bp Feature: gene Location: 57907-58374 bp Ori: EZR17355.1 Feature: domain Description: PRK00872 Location: 57913-58369 bp Feature: domain Description: PRK00872 Location: 57913-58369 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK00872 (hypothetical protein; Provisional)