myRT

myRT report for GCA_000690035.1_Pgalathea

Download annotations/find similar RTs

Seq: JJNY01000048.1 Pseudoalteromonas sp. S3431 contig0051, whole genome shotgun sequence (44071 bp)
Overview 1 RT 1: 31213-38394 bp Neighborhood of RT #1 [31213, 38456] PRK10604 PRK10604 RVT-Retrons PrtC DUF3656 PrtC GST_N_Omega_like GST_C_5 Feature: gene Location: 31213-32817 bp Ori: KDC53888.1 Feature: domain Description: PRK10604 Location: 31219-31588 bp Feature: domain Description: PRK1 0604 Location: 31 21 9-31 588 bp Feature: domain Description: PRK10604 Location: 31627-32812 bp Feature: domain Description: PRK1 0604 Location: 31 627-3281 2 bp Feature: gene Location: 32998-33735 bp Feature: gene Location: 33725-34912 bp Ori: KDC53890.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33872-34454 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33872-34454 bp Feature: gene Location: 35495-37786 bp Ori: KDC53891.1 Feature: domain Description: PrtC Location: 35504-36455 bp Feature: domain Description: PrtC Location: 35504-36455 bp Feature: domain Description: DUF3656 Location: 36623-36854 bp Feature: domain Description: DUF3656 Location: 36623-36854 bp Feature: domain Description: PrtC Location: 37112-37490 bp Feature: domain Description: PrtC Location: 371 1 2-37490 bp Feature: gene Location: 37797-38456 bp Ori: KDC53892.1 Feature: domain Description: GST_N_Omega_like Location: 37809-38019 bp Feature: domain Description: GST_N_Omega_like Location: 37809-3801 9 bp Feature: domain Description: GST_C_5 Location: 38061-38394 bp Feature: domain Description: GST_C_5 Location: 38061 -38394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10604 (sensor protein RstB; Provisional), RVT-Retrons, PrtC (COG0826), DUF3656 (pfam12392), GST_N_Omega_like (cd03060), GST_C_5 (pfam16865)

Seq: JJNY01000088.1 Pseudoalteromonas sp. S3431 contig0091, whole genome shotgun sequence (33597 bp)
Overview 1 RT 1: 3389-10843 bp Neighborhood of RT #1 [3389, 10854] NhaC RVT-UG15 PRK12513 Feature: gene Location: 3389-4765 bp Ori: KDC51265.1 Feature: domain Description: NhaC Location: 3401-4754 bp Feature: domain Description: NhaC Location: 3401-4754 bp Feature: gene Location: 6303-7373 bp Feature: gene Location: 7937-9580 bp Ori: KDC51267.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 8357-8762 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 8357-8762 bp Feature: gene Location: 9636-10259 bp Feature: gene Location: 10246-10854 bp Ori: KDC51269.1 Feature: domain Description: PRK12513 Location: 10294-10843 bp Feature: domain Description: PRK12 513 Location: 102 94-10843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NhaC (COG1757), RVT-UG15, PRK12513 (RNA polymerase sigma factor; Provisional)