myRT

myRT report for GCA_000691045.1_S7380

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Seq: JICD01000013.1 (114629 bp)
Overview 1 RT 1: 23583-27938 bp Neighborhood of RT #1 [23583, 27961] HTH_XRE RVT-Retrons PRK13889 TraD Feature: gene Location: 23583-23798 bp Feature: gene Location: 23889-24170 bp Feature: domain Description: HTH_XRE Location: 23904-24069 bp Feature: domain Description: HTH_XRE Location: 23904-24069 bp Feature: gene Location: 24163-25263 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24304-24856 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24304-24856 bp Feature: gene Location: 25340-26842 bp Feature: domain Description: PRK13889 Location: 25343-25922 bp Feature: domain Description: PRK1 3889 Location: 25343-25922 bp Feature: gene Location: 27650-27961 bp Feature: domain Description: TraD Location: 27764-27938 bp Feature: domain Description: TraD Location: 27764-27938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional), TraD (pfam06412)

Seq: JICD01000043.1 (36031 bp)
Overview 1 RT 1: 3-2230 bp Neighborhood of RT #1 [3, 2265] RVT-GII GIIM PHA02517 Glu-decarb-GAD Feature: gene Location: 3-788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60-270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60-2 70 bp Feature: domain Description: GIIM Note: maturase Location: 345-564 bp Feature: domain Description: GIIM Note: maturase Location: 345-564 bp Feature: gene Location: 941-1357 bp Feature: domain Description: PHA02517 Location: 944-1346 bp Feature: domain Description: PHA02 517 Location: 944-1346 bp Feature: gene Location: 1780-2265 bp Feature: domain Description: Glu-decarb-GAD Location: 1849-2230 bp Feature: domain Description: Glu-decarb-GAD Location: 1849-2 2 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Glu-decarb-GAD (TIGR01788)

Seq: JICD01000173.1 (2404 bp)
Overview 1 RT 1: 191-2403 bp Neighborhood of RT #1 [191, 2403] RVT-GII GIIM Feature: gene Location: 191-1714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1196 bp Feature: domain Description: GIIM Note: maturase Location: 1271-1469 bp Feature: domain Description: GIIM Note: maturase Location: 1271-1469 bp Feature: gene Location: 2008-2403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)