myRT

myRT report for GCA_000692635.1_Esch_coli_BIDMC_77_V1

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Seq: KK736422.1 Escherichia coli BIDMC 77 genomic scaffold aeeaD-supercont1.2, whole genome shotgun sequence (1007461 bp)
Overview 1 RT 1: 298488-304519 bp Neighborhood of RT #1 [298488, 304656] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 298488-298628 bp Ori: KDG36799.1 Feature: domain Description: SfsB Location: 298497-298569 bp Feature: domain Description: SfsB Location: 298497-298569 bp Feature: gene Location: 298625-299095 bp Feature: gene Location: 299442-302651 bp Ori: KDG36801.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 299970-300459 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 299970-300459 bp Feature: domain Description: nitrilase Location: 301965-302562 bp Feature: domain Description: nitrilase Location: 301 965-302562 bp Feature: gene Location: 302967-303749 bp Ori: KDG36802.1 Feature: domain Description: AbiEi_3_N Location: 302979-303240 bp Feature: domain Description: AbiEi_3_N Location: 302979-303240 bp Feature: domain Description: AbiEi_3 Location: 303252-303708 bp Feature: domain Description: AbiEi_3 Location: 303252-303708 bp Feature: gene Location: 303736-304656 bp Ori: KDG36803.1 Feature: domain Description: AbiEii Location: 303778-304519 bp Feature: domain Description: AbiEii Location: 303778-30451 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: KK736423.1 Escherichia coli BIDMC 77 genomic scaffold aeeaD-supercont1.3, whole genome shotgun sequence (594615 bp)
Overview 1 RT 1: 425794-429505 bp Neighborhood of RT #1 [425794, 429579] InsE PHA02517 RVT-GII GIIM PHA02517 DUF2254 Feature: gene Location: 425794-426066 bp Ori: KDG34099.1 Feature: domain Description: InsE Location: 425803-426052 bp Feature: domain Description: InsE Location: 42 5803-42 6052 bp Feature: gene Location: 426308-426547 bp Ori: KDG34100.1 Feature: domain Description: PHA02517 Location: 426311-426482 bp Feature: domain Description: PHA02 517 Location: 42 6311-42 6482 bp Feature: gene Location: 427139-428662 bp Ori: KDG34101.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427412-428144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 7412 -42 8144 bp Feature: domain Description: GIIM Note: maturase Location: 428219-428417 bp Feature: domain Description: GIIM Note: maturase Location: 42 82 19-42 8417 bp Feature: gene Location: 428857-429231 bp Ori: KDG34102.1 Feature: domain Description: PHA02517 Location: 428860-429220 bp Feature: domain Description: PHA02 517 Location: 42 8860-42 92 2 0 bp Feature: gene Location: 429166-429579 bp Ori: KDG34103.1 Feature: domain Description: DUF2254 Location: 429208-429505 bp Feature: domain Description: DUF2 2 54 Location: 42 92 08-42 9505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DUF2254 (pfam10011)