myRT

myRT report for GCA_000692715.1_Esch_coli_CHS_69_V1

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Seq: KK736474.1 (2015249 bp)
Overview 1 RT 1: 1347690-1354032 bp 2 RT 2: 1494105-1498076 bp Neighborhood of RT #1 [1347690, 1354032] PRK11388 RVT-Retrons Neighborhood of RT #2 [1494105, 1498076] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 1347690-1349609 bp Ori: KDG51328.1 Feature: domain Description: PRK11388 Location: 1347693-1349601 bp Feature: domain Description: PRK1 1 388 Location: 1 347693-1 349601 bp Feature: gene Location: 1350091-1350330 bp Feature: gene Location: 1350901-1352658 bp Ori: KDG51330.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1351045-1351663 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 351 045-1 351 663 bp Feature: gene Location: 1352680-1352847 bp Feature: gene Location: 1352905-1354032 bp Feature: gene Location: 1494105-1495007 bp Ori: KDG50148.1 Feature: domain Description: Macro_Appr_pase Location: 1494123-1494636 bp Feature: domain Description: Macro_Appr_pase Location: 1 4941 23-1 494636 bp Feature: gene Location: 1495016-1495600 bp Ori: KDG50149.1 Feature: domain Description: Caudo_TAP Location: 1495232-1495589 bp Feature: domain Description: Caudo_TAP Location: 1 495232-1 495589 bp Feature: gene Location: 1495713-1497083 bp Ori: KDG50150.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1495941-1496547 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 495941 -1 496547 bp Feature: gene Location: 1497061-1497612 bp Ori: KDG50151.1 Feature: domain Description: SLATT_5 Location: 1497070-1497583 bp Feature: domain Description: SLATT_5 Location: 1 497070-1 497583 bp Feature: gene Location: 1497978-1498076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons, Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)

Seq: KK736476.1 (103620 bp)
Overview 1 RT 1: 10315-14103 bp Neighborhood of RT #1 [10315, 14141] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 10315-10641 bp Ori: KDG47913.1 Feature: domain Description: InsE Location: 10318-10639 bp Feature: domain Description: InsE Location: 10318-10639 bp Feature: gene Location: 10641-11120 bp Ori: KDG47914.1 Feature: domain Description: PHA02517 Location: 10701-11055 bp Feature: domain Description: PHA02 517 Location: 10701-11055 bp Feature: gene Location: 11712-13235 bp Ori: KDG47915.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11985-12717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11985-12 717 bp Feature: domain Description: GIIM Note: maturase Location: 12792-12990 bp Feature: domain Description: GIIM Note: maturase Location: 12 792 -12 990 bp Feature: gene Location: 13352-13708 bp Ori: KDG47916.1 Feature: domain Description: PHA02517 Location: 13355-13664 bp Feature: domain Description: PHA02 517 Location: 13355-13664 bp Feature: gene Location: 13737-14141 bp Ori: KDG47917.1 Feature: domain Description: InsE Location: 13767-14103 bp Feature: domain Description: InsE Location: 13767-14103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)