myRT

myRT report for GCA_000692875.1_Esch_coli_UCI_65_V1

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Seq: KK736565.1 Escherichia coli UCI 65 genomic scaffold aeeaY-supercont1.4, whole genome shotgun sequence (90652 bp)
Overview 1 RT 1: 84821-87618 bp Neighborhood of RT #1 [84821, 87620] PRK10173 PRK10173 RVT-GII PHA02517 InsE Feature: gene Location: 84821-85270 bp Ori: KDG84604.1 Feature: domain Description: PRK10173 Location: 84824-85262 bp Feature: domain Description: PRK1 01 73 Location: 84824-85262 bp Feature: gene Location: 85245-85565 bp Ori: KDG84605.1 Feature: domain Description: PRK10173 Location: 85248-85476 bp Feature: domain Description: PRK1 01 73 Location: 85248-85476 bp Feature: gene Location: 85761-86223 bp Ori: KDG84389.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86034-86103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86034-861 03 bp Feature: gene Location: 86815-87294 bp Ori: KDG84390.1 Feature: domain Description: PHA02517 Location: 86875-87229 bp Feature: domain Description: PHA0251 7 Location: 86875-87229 bp Feature: gene Location: 87294-87620 bp Ori: KDG84391.1 Feature: domain Description: InsE Location: 87297-87618 bp Feature: domain Description: InsE Location: 87297-8761 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: KK736563.1 Escherichia coli UCI 65 genomic scaffold aeeaY-supercont1.2, whole genome shotgun sequence (1833231 bp)
Overview 1 RT 1: 22977-27243 bp 2 RT 2: 1523349-1528668 bp Neighborhood of RT #1 [22977, 27245] FaeA PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [1523349, 1528694] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 22977-23198 bp Ori: KDG92511.1 Feature: domain Description: FaeA Location: 22980-23157 bp Feature: domain Description: FaeA Location: 2 2 980-2 3157 bp Feature: gene Location: 23849-24208 bp Ori: KDG92512.1 Feature: domain Description: PHA02517 Location: 23852-24206 bp Feature: domain Description: PHA02 517 Location: 2 3852 -2 42 06 bp Feature: gene Location: 24325-25848 bp Ori: KDG92513.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24598-25330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4598-2 5330 bp Feature: domain Description: GIIM Note: maturase Location: 25405-25603 bp Feature: domain Description: GIIM Note: maturase Location: 2 5405-2 5603 bp Feature: gene Location: 26440-26919 bp Ori: KDG92514.1 Feature: domain Description: PHA02517 Location: 26500-26854 bp Feature: domain Description: PHA02 517 Location: 2 6500-2 6854 bp Feature: gene Location: 26919-27245 bp Ori: KDG92515.1 Feature: domain Description: InsE Location: 26922-27243 bp Feature: domain Description: InsE Location: 2 692 2 -2 72 43 bp Feature: gene Location: 1523349-1524578 bp Ori: KDG88703.1 Feature: domain Description: YesM Location: 1523829-1524570 bp Feature: domain Description: YesM Location: 152 382 9-152 4570 bp Feature: gene Location: 1524651-1524839 bp Feature: gene Location: 1525161-1525643 bp Ori: KDG88705.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1525170-1525410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 5170-152 5410 bp Feature: domain Description: GIIM Note: maturase Location: 1525458-1525638 bp Feature: domain Description: GIIM Note: maturase Location: 152 5458-152 5638 bp Feature: gene Location: 1525710-1526249 bp Ori: KDG88706.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1526040-1526118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 6040-152 6118 bp Feature: gene Location: 1526735-1527640 bp Feature: gene Location: 1527777-1528694 bp Ori: KDG88708.1 Feature: domain Description: PFLE_PFLC Location: 1527813-1528668 bp Feature: domain Description: PFLE_PFLC Location: 152 7813-152 8668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FaeA (pfam04703), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), YesM (COG2972), PFLE_PFLC (TIGR02494)

Seq: KK736562.1 Escherichia coli UCI 65 genomic scaffold aeeaY-supercont1.1, whole genome shotgun sequence (3268328 bp)
Overview 1 RT 1: 294773-300804 bp 2 RT 2: 2162849-2168712 bp 3 RT 3: 2177282-2181858 bp Neighborhood of RT #1 [294773, 300941] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Neighborhood of RT #2 [2162849, 2168726] PRK13381 DcuC RVT-GII Asparaginase_2 DUF5339 Neighborhood of RT #3 [2177282, 2181962] FadR PHA02517 RVT-GII GIIM InsE TnpB_IS66 Feature: gene Location: 294773-294913 bp Ori: KDH01324.1 Feature: domain Description: SfsB Location: 294782-294854 bp Feature: domain Description: SfsB Location: 294782-294854 bp Feature: gene Location: 294910-295380 bp Feature: gene Location: 295727-298936 bp Ori: KDH01326.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 296255-296744 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 296255-296744 bp Feature: domain Description: nitrilase Location: 298250-298847 bp Feature: domain Description: nitrilase Location: 298250-298847 bp Feature: gene Location: 299252-300034 bp Ori: KDH01327.1 Feature: domain Description: AbiEi_3_N Location: 299264-299525 bp Feature: domain Description: AbiEi_3 _N Location: 299264-299525 bp Feature: domain Description: AbiEi_3 Location: 299537-299993 bp Feature: domain Description: AbiEi_3 Location: 29953 7-299993 bp Feature: gene Location: 300021-300941 bp Ori: KDH01328.1 Feature: domain Description: AbiEii Location: 300063-300804 bp Feature: domain Description: AbiEii Location: 3 00063 -3 00804 bp Feature: gene Location: 2162849-2164105 bp Ori: KDG96258.1 Feature: domain Description: PRK13381 Location: 2162855-2164070 bp Feature: domain Description: PRK13 3 81 Location: 2162855-2164070 bp Feature: gene Location: 2164102-2165463 bp Ori: KDG96259.1 Feature: domain Description: DcuC Location: 2164105-2165437 bp Feature: domain Description: DcuC Location: 2164105-216543 7 bp Feature: gene Location: 2166109-2166555 bp Ori: KDG96260.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2166415-2166517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2166415-2166517 bp Feature: gene Location: 2167079-2168110 bp Ori: KDG96261.1 Feature: domain Description: Asparaginase_2 Location: 2167169-2168102 bp Feature: domain Description: Asparaginase_2 Location: 2167169-2168102 bp Feature: gene Location: 2168448-2168726 bp Ori: KDG96262.1 Feature: domain Description: DUF5339 Location: 2168511-2168712 bp Feature: domain Description: DUF53 3 9 Location: 2168511-2168712 bp Feature: gene Location: 2177282-2177416 bp Ori: KDG96272.1 Feature: domain Description: FadR Location: 2177297-2177399 bp Feature: domain Description: FadR Location: 2177297-21773 99 bp Feature: gene Location: 2177636-2178076 bp Ori: KDG96273.1 Feature: domain Description: PHA02517 Location: 2177639-2178047 bp Feature: domain Description: PHA02517 Location: 217763 9-2178047 bp Feature: gene Location: 2178205-2179728 bp Ori: KDG96274.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2178478-2179210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2178478-2179210 bp Feature: domain Description: GIIM Note: maturase Location: 2179285-2179483 bp Feature: domain Description: GIIM Note: maturase Location: 2179285-2179483 bp Feature: gene Location: 2180772-2181083 bp Ori: KDG96275.1 Feature: domain Description: InsE Location: 2180775-2181066 bp Feature: domain Description: InsE Location: 2180775-2181066 bp Feature: gene Location: 2181630-2181962 bp Ori: KDG96276.1 Feature: domain Description: TnpB_IS66 Location: 2181657-2181858 bp Feature: domain Description: TnpB_IS66 Location: 2181657-2181858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843), PRK13381 (peptidase T; Provisional), DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)
DUF5339 (pfam17274), FadR (COG2186), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), InsE (COG2963), TnpB_IS66 (pfam05717)