myRT

myRT report for GCA_000692915.1_Kleb_pneu_BIDMC_18B_V1

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Seq: KK736590.1 Klebsiella pneumoniae BIDMC 18B genomic scaffold aeeTw-supercont1.4, whole genome shotgun sequence (213337 bp)
Overview 1 RT 1: 166944-171935 bp Neighborhood of RT #1 [166944, 171940] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 166944-167369 bp Feature: domain Description: Antirestrict Location: 167079-167367 bp Feature: domain Description: Antirestrict Location: 1 67079-1 67367 bp Feature: gene Location: 167890-168120 bp Feature: gene Location: 168354-169838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168756-169446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 68756-1 69446 bp Feature: gene Location: 170244-170669 bp Feature: domain Description: PRK10276 Location: 170247-170655 bp Feature: domain Description: PRK1 0276 Location: 1 70247-1 70655 bp Feature: gene Location: 170669-171940 bp Feature: domain Description: umuC Location: 170672-171935 bp Feature: domain Description: umuC Location: 1 70672-1 71 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK736588.1 Klebsiella pneumoniae BIDMC 18B genomic scaffold aeeTw-supercont1.2, whole genome shotgun sequence (1595676 bp)
Overview 1 RT 1: 589943-593350 bp 2 RT 2: 1032597-1038202 bp 3 RT 3: 1419272-1424690 bp Neighborhood of RT #1 [589943, 593451] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1032597, 1038228] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1419272, 1424692] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 589943-590674 bp Feature: domain Description: Laminin_G_3 Location: 590264-590618 bp Feature: domain Description: Laminin_G_3 Location: 5902 64-590618 bp Feature: gene Location: 590671-590880 bp Feature: gene Location: 591333-592817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591735-592425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591735-592 42 5 bp Feature: gene Location: 592895-593134 bp Feature: gene Location: 593134-593451 bp Feature: domain Description: PRK10276 Location: 593140-593254 bp Feature: domain Description: PRK102 76 Location: 593140-5932 54 bp Feature: domain Description: PRK10276 Location: 593281-593350 bp Feature: domain Description: PRK102 76 Location: 5932 81-593350 bp Feature: gene Location: 1032597-1033160 bp Feature: domain Description: YbjK Location: 1032603-1033140 bp Feature: domain Description: YbjK Location: 1032 603-1033140 bp Feature: gene Location: 1033283-1034335 bp Feature: domain Description: int Location: 1033286-1034285 bp Feature: domain Description: int Location: 10332 86-10342 85 bp Feature: gene Location: 1034754-1036238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035156-1035846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035156-1035846 bp Feature: gene Location: 1036337-1037281 bp Feature: gene Location: 1037293-1038228 bp Feature: domain Description: Phage_CI_repr Location: 1037377-1037560 bp Feature: domain Description: Phage_CI_repr Location: 1037377-1037560 bp Feature: domain Description: Phage_CI_repr Location: 1037689-1037881 bp Feature: domain Description: Phage_CI_repr Location: 1037689-1037881 bp Feature: domain Description: Phage_CI_C Location: 1037908-1038202 bp Feature: domain Description: Phage_CI_C Location: 1037908-10382 02 bp Feature: gene Location: 1419272-1420411 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1419455-1420355 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1419455-142 0355 bp Feature: gene Location: 1420582-1420824 bp Feature: domain Description: DinI Location: 1420633-1420813 bp Feature: domain Description: DinI Location: 142 0633-142 0813 bp Feature: gene Location: 1421442-1422926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1421844-1422534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 1844-142 2 534 bp Feature: gene Location: 1423005-1423424 bp Feature: domain Description: PRK10276 Location: 1423008-1423419 bp Feature: domain Description: PRK102 76 Location: 142 3008-142 3419 bp Feature: gene Location: 1423427-1424692 bp Feature: domain Description: umuC Location: 1423430-1424690 bp Feature: domain Description: umuC Location: 142 3430-142 4690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK736587.1 Klebsiella pneumoniae BIDMC 18B genomic scaffold aeeTw-supercont1.1, whole genome shotgun sequence (3322148 bp)
Overview 1 RT 1: 106-5336 bp 2 RT 2: 1241457-1247940 bp Neighborhood of RT #1 [106, 5338] PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1241457, 1247942] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 106-555 bp Feature: domain Description: PinE Location: 115-547 bp Feature: domain Description: PinE Location: 115-547 bp Feature: gene Location: 2088-3572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2490-3180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2490-3 180 bp Feature: gene Location: 3565-4071 bp Feature: domain Description: PRK10276 Location: 3655-4066 bp Feature: domain Description: PRK10276 Location: 3 655-4066 bp Feature: gene Location: 4073-5338 bp Feature: domain Description: umuC Location: 4076-5336 bp Feature: domain Description: umuC Location: 4076-53 3 6 bp Feature: gene Location: 1241457-1242515 bp Feature: domain Description: YccC Location: 1241463-1242501 bp Feature: domain Description: YccC Location: 1241463 -1242501 bp Feature: gene Location: 1242614-1243087 bp Feature: domain Description: PRK10016 Location: 1242617-1243076 bp Feature: domain Description: PRK10016 Location: 1242617-1243 076 bp Feature: gene Location: 1243169-1244653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1243571-1244261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1243 571-1244261 bp Feature: gene Location: 1245174-1246337 bp Feature: domain Description: dacD Location: 1245177-1246332 bp Feature: domain Description: dacD Location: 1245177-12463 3 2 bp Feature: gene Location: 1246518-1247942 bp Feature: domain Description: SbcB Location: 1246524-1247940 bp Feature: domain Description: SbcB Location: 1246524-1247940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736591.1 Klebsiella pneumoniae BIDMC 18B genomic scaffold aeeTw-supercont1.5, whole genome shotgun sequence (56792 bp)
Overview 1 RT 1: 47351-51787 bp Neighborhood of RT #1 [47351, 51795] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 47351-47728 bp Feature: domain Description: DDE_Tnp_IS1 Location: 47354-47726 bp Feature: domain Description: DDE_Tnp_IS1 Location: 4 7354 -4 7726 bp Feature: gene Location: 47773-48048 bp Feature: domain Description: InsA Location: 47779-48040 bp Feature: domain Description: InsA Location: 4 7779-4 804 0 bp Feature: gene Location: 48200-49684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48602-49292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 8602-4 9292 bp Feature: gene Location: 50093-50524 bp Feature: domain Description: PRK10276 Location: 50144-50507 bp Feature: domain Description: PRK10276 Location: 5014 4 -50507 bp Feature: gene Location: 50524-51795 bp Feature: domain Description: umuC Location: 50527-51787 bp Feature: domain Description: umuC Location: 50527-51787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)