myRT

myRT report for GCA_000692935.1_Kleb_pneu_BIDMC_54_V1

Download annotations/find similar RTs

Seq: KK736598.1 Klebsiella pneumoniae BIDMC 54 genomic scaffold aeeat-supercont1.1, whole genome shotgun sequence (2950297 bp)
Overview 1 RT 1: 330155-333562 bp 2 RT 2: 745764-751369 bp 3 RT 3: 1085371-1090789 bp 4 RT 4: 2444826-2451309 bp Neighborhood of RT #1 [330155, 333663] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [745764, 751395] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1085371, 1090791] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2444826, 2451311] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 330155-330886 bp Feature: domain Description: Laminin_G_3 Location: 330476-330830 bp Feature: domain Description: Laminin_G_3 Location: 330476-330830 bp Feature: gene Location: 330883-331092 bp Feature: gene Location: 331545-333029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331947-332637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 947-332637 bp Feature: gene Location: 333107-333346 bp Feature: gene Location: 333346-333663 bp Feature: domain Description: PRK10276 Location: 333352-333466 bp Feature: domain Description: PRK1 0276 Location: 333352-333466 bp Feature: domain Description: PRK10276 Location: 333493-333562 bp Feature: domain Description: PRK1 0276 Location: 333493-333562 bp Feature: gene Location: 745764-746327 bp Feature: domain Description: YbjK Location: 745770-746307 bp Feature: domain Description: YbjK Location: 745770-746307 bp Feature: gene Location: 746450-747502 bp Feature: domain Description: int Location: 746453-747452 bp Feature: domain Description: int Location: 746453-747452 bp Feature: gene Location: 747921-749405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748323-749013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748323-74901 3 bp Feature: gene Location: 749504-750448 bp Feature: gene Location: 750460-751395 bp Feature: domain Description: Phage_CI_repr Location: 750544-750727 bp Feature: domain Description: Phage_CI_repr Location: 750544-750727 bp Feature: domain Description: Phage_CI_repr Location: 750856-751048 bp Feature: domain Description: Phage_CI_repr Location: 750856-751 048 bp Feature: domain Description: Phage_CI_C Location: 751075-751369 bp Feature: domain Description: Phage_CI_C Location: 751 075-751 369 bp Feature: gene Location: 1085371-1086510 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1085554-1086454 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 085554-1 086454 bp Feature: gene Location: 1086681-1086923 bp Feature: domain Description: DinI Location: 1086732-1086912 bp Feature: domain Description: DinI Location: 1 086732-1 08691 2 bp Feature: gene Location: 1087541-1089025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1087943-1088633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 087943-1 088633 bp Feature: gene Location: 1089104-1089523 bp Feature: domain Description: PRK10276 Location: 1089107-1089518 bp Feature: domain Description: PRK1 0276 Location: 1 0891 07-1 08951 8 bp Feature: gene Location: 1089526-1090791 bp Feature: domain Description: umuC Location: 1089529-1090789 bp Feature: domain Description: umuC Location: 1 089529-1 090789 bp Feature: gene Location: 2444826-2445884 bp Feature: domain Description: YccC Location: 2444832-2445870 bp Feature: domain Description: YccC Location: 2444832-2445870 bp Feature: gene Location: 2445983-2446456 bp Feature: domain Description: PRK10016 Location: 2445986-2446445 bp Feature: domain Description: PRK1 001 6 Location: 2445986-2446445 bp Feature: gene Location: 2446538-2448022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2446940-2447630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2446940-2447630 bp Feature: gene Location: 2448543-2449706 bp Feature: domain Description: dacD Location: 2448546-2449701 bp Feature: domain Description: dacD Location: 2448546-2449701 bp Feature: gene Location: 2449887-2451311 bp Feature: domain Description: SbcB Location: 2449893-2451309 bp Feature: domain Description: SbcB Location: 2449893-2451 309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736603.1 Klebsiella pneumoniae BIDMC 54 genomic scaffold aeeat-supercont1.6, whole genome shotgun sequence (107887 bp)
Overview 1 RT 1: 104401-107595 bp Neighborhood of RT #1 [104401, 107887] umuC PRK10276 RVT-GII Feature: gene Location: 104401-105672 bp Feature: domain Description: umuC Location: 104404-105667 bp Feature: domain Description: umuC Location: 104404-105667 bp Feature: gene Location: 105672-106097 bp Feature: domain Description: PRK10276 Location: 105675-106083 bp Feature: domain Description: PRK102 76 Location: 105675-106083 bp Feature: gene Location: 106503-107887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106905-107595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106905-107595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII