myRT

myRT report for GCA_000693015.1_Kleb_pneu_BIDMC_68_V1

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Seq: KK736639.1 Klebsiella pneumoniae BIDMC 68 genomic scaffold aedYZ-supercont1.1, whole genome shotgun sequence (2649360 bp)
Overview 1 RT 1: 1243458-1249941 bp Neighborhood of RT #1 [1243458, 1249943] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1243458-1244516 bp Feature: domain Description: YccC Location: 1243464-1244502 bp Feature: domain Description: YccC Location: 1 243464-1 244502 bp Feature: gene Location: 1244615-1245088 bp Feature: domain Description: PRK10016 Location: 1244618-1245077 bp Feature: domain Description: PRK1 001 6 Location: 1 24461 8-1 245077 bp Feature: gene Location: 1245170-1246657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1245575-1246265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 245575-1 246265 bp Feature: gene Location: 1247175-1248338 bp Feature: domain Description: dacD Location: 1247178-1248333 bp Feature: domain Description: dacD Location: 1 2471 78-1 248333 bp Feature: gene Location: 1248519-1249943 bp Feature: domain Description: SbcB Location: 1248525-1249941 bp Feature: domain Description: SbcB Location: 1 248525-1 249941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK736644.1 Klebsiella pneumoniae BIDMC 68 genomic scaffold aedYZ-supercont1.6, whole genome shotgun sequence (175985 bp)
Overview 1 RT 1: 116761-121752 bp Neighborhood of RT #1 [116761, 121757] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 116761-117186 bp Feature: domain Description: Antirestrict Location: 116896-117184 bp Feature: domain Description: Antirestrict Location: 116896-117184 bp Feature: gene Location: 117707-117937 bp Feature: gene Location: 118171-119658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118576-119266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118576-1192 66 bp Feature: gene Location: 120061-120486 bp Feature: domain Description: PRK10276 Location: 120064-120472 bp Feature: domain Description: PRK102 76 Location: 12 0064-12 0472 bp Feature: gene Location: 120486-121757 bp Feature: domain Description: umuC Location: 120489-121752 bp Feature: domain Description: umuC Location: 12 0489-12 1752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK736640.1 Klebsiella pneumoniae BIDMC 68 genomic scaffold aedYZ-supercont1.2, whole genome shotgun sequence (1290222 bp)
Overview 1 RT 1: 327497-330904 bp 2 RT 2: 768843-774448 bp 3 RT 3: 1111345-1116763 bp Neighborhood of RT #1 [327497, 331005] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [768843, 774474] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1111345, 1116765] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 327497-328228 bp Feature: domain Description: Laminin_G_3 Location: 327818-328172 bp Feature: domain Description: Laminin_G_3 Location: 3 27818-3 28172 bp Feature: gene Location: 328225-328434 bp Feature: gene Location: 328884-330371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329289-329979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 29289-3 29979 bp Feature: gene Location: 330449-330688 bp Feature: gene Location: 330688-331005 bp Feature: domain Description: PRK10276 Location: 330694-330808 bp Feature: domain Description: PRK10276 Location: 3 3 0694-3 3 0808 bp Feature: domain Description: PRK10276 Location: 330835-330904 bp Feature: domain Description: PRK10276 Location: 3 3 083 5-3 3 0904 bp Feature: gene Location: 768843-769406 bp Feature: domain Description: YbjK Location: 768849-769386 bp Feature: domain Description: YbjK Location: 768849-7693 86 bp Feature: gene Location: 769529-770581 bp Feature: domain Description: int Location: 769532-770531 bp Feature: domain Description: int Location: 76953 2-77053 1 bp Feature: gene Location: 770997-772484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771402-772092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771402-772092 bp Feature: gene Location: 772583-773527 bp Feature: gene Location: 773539-774474 bp Feature: domain Description: Phage_CI_repr Location: 773623-773806 bp Feature: domain Description: Phage_CI_repr Location: 773 623 -773 806 bp Feature: domain Description: Phage_CI_repr Location: 773935-774127 bp Feature: domain Description: Phage_CI_repr Location: 773 93 5-774127 bp Feature: domain Description: Phage_CI_C Location: 774154-774448 bp Feature: domain Description: Phage_CI_C Location: 774154-774448 bp Feature: gene Location: 1111345-1112484 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1111528-1112428 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1111528-1112428 bp Feature: gene Location: 1112655-1112897 bp Feature: domain Description: DinI Location: 1112706-1112886 bp Feature: domain Description: DinI Location: 1112706-1112886 bp Feature: gene Location: 1113512-1114999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1113917-1114607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1113 917-1114607 bp Feature: gene Location: 1115078-1115497 bp Feature: domain Description: PRK10276 Location: 1115081-1115492 bp Feature: domain Description: PRK10276 Location: 1115081-1115492 bp Feature: gene Location: 1115500-1116765 bp Feature: domain Description: umuC Location: 1115503-1116763 bp Feature: domain Description: umuC Location: 1115503 -1116763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)