myRT

myRT report for GCA_000693055.1_Kleb_pneu_BWH_45_V1

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Seq: KK736666.1 Klebsiella pneumoniae BWH 45 genomic scaffold aedZu-supercont1.1, whole genome shotgun sequence (5166738 bp)
Overview 1 RT 1: 582155-585562 bp 2 RT 2: 1024817-1030491 bp 3 RT 3: 1368524-1373942 bp 4 RT 4: 2874317-2880800 bp Neighborhood of RT #1 [582155, 585663] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1024817, 1030505] YbjK int RVT-GII IS5 Neighborhood of RT #3 [1368524, 1373944] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2874317, 2880802] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 582155-582886 bp Ori: KDH43740.1 Feature: domain Description: Laminin_G_3 Location: 582476-582830 bp Feature: domain Description: Laminin_G_3 Location: 582476-582830 bp Feature: gene Location: 582883-583092 bp Feature: gene Location: 583542-585029 bp Ori: KDH43742.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583947-584637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583947-584637 bp Feature: gene Location: 585107-585346 bp Feature: gene Location: 585346-585663 bp Ori: KDH43744.1 Feature: domain Description: PRK10276 Location: 585352-585466 bp Feature: domain Description: PRK1 0276 Location: 585352-585466 bp Feature: domain Description: PRK10276 Location: 585493-585562 bp Feature: domain Description: PRK1 0276 Location: 585493-585562 bp Feature: gene Location: 1024817-1025380 bp Ori: KDH44135.1 Feature: domain Description: YbjK Location: 1024823-1025360 bp Feature: domain Description: YbjK Location: 1 024823-1 025360 bp Feature: gene Location: 1025503-1026555 bp Ori: KDH44136.1 Feature: domain Description: int Location: 1025506-1026505 bp Feature: domain Description: int Location: 1 025506-1 026505 bp Feature: gene Location: 1026971-1028458 bp Ori: KDH44137.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1027376-1028066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 027376-1 028066 bp Feature: gene Location: 1028557-1029318 bp Feature: gene Location: 1029525-1030505 bp Ori: KDH44139.1 Feature: domain Description: IS5 Location: 1029714-1030491 bp Feature: domain Description: IS5 Location: 1 02971 4-1 030491 bp Feature: gene Location: 1368524-1369663 bp Ori: KDH44462.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1368707-1369607 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 368707-1 369607 bp Feature: gene Location: 1369834-1370076 bp Ori: KDH44463.1 Feature: domain Description: DinI Location: 1369885-1370065 bp Feature: domain Description: DinI Location: 1 369885-1 370065 bp Feature: gene Location: 1370691-1372178 bp Ori: KDH44464.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371096-1371786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 371 096-1 371 786 bp Feature: gene Location: 1372257-1372676 bp Ori: KDH44465.1 Feature: domain Description: PRK10276 Location: 1372260-1372671 bp Feature: domain Description: PRK1 0276 Location: 1 372260-1 372671 bp Feature: gene Location: 1372679-1373944 bp Ori: KDH44466.1 Feature: domain Description: umuC Location: 1372682-1373942 bp Feature: domain Description: umuC Location: 1 372682-1 373942 bp Feature: gene Location: 2874317-2875375 bp Ori: KDH42548.1 Feature: domain Description: YccC Location: 2874323-2875361 bp Feature: domain Description: YccC Location: 2874323-2875361 bp Feature: gene Location: 2875474-2875947 bp Ori: KDH42549.1 Feature: domain Description: PRK10016 Location: 2875477-2875936 bp Feature: domain Description: PRK1 001 6 Location: 2875477-2875936 bp Feature: gene Location: 2876029-2877516 bp Ori: KDH42550.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2876434-2877124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2876434-28771 24 bp Feature: gene Location: 2878034-2879197 bp Ori: KDH42551.1 Feature: domain Description: dacD Location: 2878037-2879192 bp Feature: domain Description: dacD Location: 2878037-28791 92 bp Feature: gene Location: 2879378-2880802 bp Ori: KDH42552.1 Feature: domain Description: SbcB Location: 2879384-2880800 bp Feature: domain Description: SbcB Location: 2879384-2880800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), IS5 (COG3039), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609), YccC (COG1289)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736670.1 Klebsiella pneumoniae BWH 45 genomic scaffold aedZu-supercont1.5, whole genome shotgun sequence (88252 bp)
Overview 1 RT 1: 49123-56618 bp Neighborhood of RT #1 [49123, 56632] Phage_GPA RVT-AbiP2 Q P Feature: gene Location: 49123-51399 bp Ori: KDH37066.1 Feature: domain Description: Phage_GPA Location: 49522-50509 bp Feature: domain Description: Phage_GPA Location: 4952 2 -50509 bp Feature: gene Location: 51503-51721 bp Feature: gene Location: 51887-53431 bp Ori: KDH37068.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 52304-52757 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 52 304-52 757 bp Feature: gene Location: 53826-54860 bp Ori: KDH37069.1 Feature: domain Description: Q Location: 53829-54852 bp Feature: domain Description: Q Location: 5382 9-54852 bp Feature: gene Location: 54860-56632 bp Ori: KDH37070.1 Feature: domain Description: P Location: 54887-56618 bp Feature: domain Description: P Location: 54887-56618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, Q (PHA02536), P (PHA02535)

Seq: KK736669.1 Klebsiella pneumoniae BWH 45 genomic scaffold aedZu-supercont1.4, whole genome shotgun sequence (92565 bp)
Overview 1 RT 1: 76750-81741 bp Neighborhood of RT #1 [76750, 81746] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 76750-77175 bp Ori: KDH37880.1 Feature: domain Description: Antirestrict Location: 76885-77173 bp Feature: domain Description: Antirestrict Location: 76885-77173 bp Feature: gene Location: 77696-77926 bp Feature: gene Location: 78160-79647 bp Ori: KDH37882.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78565-79255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78565-79255 bp Feature: gene Location: 80050-80475 bp Ori: KDH37883.1 Feature: domain Description: PRK10276 Location: 80053-80461 bp Feature: domain Description: PRK10276 Location: 80053 -80461 bp Feature: gene Location: 80475-81746 bp Ori: KDH37884.1 Feature: domain Description: umuC Location: 80478-81741 bp Feature: domain Description: umuC Location: 80478-81741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)