myRT

myRT report for GCA_000693095.1_Kleb_pneu_BWH_47_V1

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Seq: KK736696.1 Klebsiella pneumoniae BWH 47 genomic scaffold aeeaM-supercont1.11, whole genome shotgun sequence (5949 bp)
Overview 1 RT 1: 2922-5657 bp Neighborhood of RT #1 [2922, 5949] SXT_TraD RVT-GII Feature: gene Location: 2922-3050 bp Feature: gene Location: 3762-5021 bp Feature: domain Description: SXT_TraD Location: 4473-4677 bp Feature: domain Description: SXT_TraD Location: 4473-4677 bp Feature: gene Location: 5123-5949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5150-5657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 50-5657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SXT_TraD (TIGR03743), RVT-GII

Seq: KK736689.1 Klebsiella pneumoniae BWH 47 genomic scaffold aeeaM-supercont1.4, whole genome shotgun sequence (105894 bp)
Overview 1 RT 1: 81267-84461 bp 2 RT 2: 86629-91642 bp Neighborhood of RT #1 [81267, 84502] umuC PRK10276 RVT-GII Neighborhood of RT #2 [86629, 91642] HHA RVT-GII INT_Cre_C Feature: gene Location: 81267-82538 bp Feature: domain Description: umuC Location: 81270-82533 bp Feature: domain Description: umuC Location: 812 70-82 533 bp Feature: gene Location: 82538-82963 bp Feature: domain Description: PRK10276 Location: 82541-82949 bp Feature: domain Description: PRK102 76 Location: 82 541-82 949 bp Feature: gene Location: 83366-84502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83771-84461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83771-84461 bp Feature: gene Location: 86629-87696 bp Feature: gene Location: 87782-88036 bp Feature: domain Description: HHA Location: 87833-88016 bp Feature: domain Description: HHA Location: 87833-88016 bp Feature: gene Location: 88550-90037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88955-89645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88955-89645 bp Feature: gene Location: 90123-91259 bp Feature: domain Description: INT_Cre_C Location: 90546-91200 bp Feature: domain Description: INT_Cre_C Location: 90546-912 00 bp Feature: gene Location: 91325-91642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, HHA (pfam05321), INT_Cre_C (cd00799)

Seq: KK736686.1 Klebsiella pneumoniae BWH 47 genomic scaffold aeeaM-supercont1.1, whole genome shotgun sequence (4763378 bp)
Overview 1 RT 1: 585369-590032 bp 2 RT 2: 931243-944658 bp 3 RT 3: 1275967-1281388 bp 4 RT 4: 1453586-1459451 bp 5 RT 5: 2839198-2845681 bp Neighborhood of RT #1 [585369, 590133] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [931243, 944663] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C dam Phage_GPA RVT-GII DinI Neighborhood of RT #3 [1275967, 1281390] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1453586, 1459453] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2839198, 2845683] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 585369-586100 bp Feature: domain Description: Laminin_G_3 Location: 585690-586044 bp Feature: domain Description: Laminin_G_3 Location: 585690-586044 bp Feature: gene Location: 586097-586306 bp Feature: gene Location: 586756-588021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587161-587851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587161-587851 bp Feature: gene Location: 589577-589816 bp Feature: gene Location: 589816-590133 bp Feature: domain Description: PRK10276 Location: 589822-589936 bp Feature: domain Description: PRK10276 Location: 589822-58993 6 bp Feature: domain Description: PRK10276 Location: 589963-590032 bp Feature: domain Description: PRK10276 Location: 589963 -59003 2 bp Feature: gene Location: 931243-931806 bp Feature: domain Description: YbjK Location: 931249-931786 bp Feature: domain Description: YbjK Location: 93 1249-93 1786 bp Feature: gene Location: 931929-932981 bp Feature: domain Description: int Location: 931932-932931 bp Feature: domain Description: int Location: 93 193 2-93 293 1 bp Feature: gene Location: 933397-934884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 933802-934492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 3 802-93 4492 bp Feature: gene Location: 934983-935927 bp Feature: gene Location: 935939-936874 bp Feature: domain Description: Phage_CI_repr Location: 936023-936206 bp Feature: domain Description: Phage_CI_repr Location: 93 6023 -93 6206 bp Feature: domain Description: Phage_CI_repr Location: 936335-936527 bp Feature: domain Description: Phage_CI_repr Location: 93 63 3 5-93 6527 bp Feature: domain Description: Phage_CI_C Location: 936554-936848 bp Feature: domain Description: Phage_CI_C Location: 93 6554-93 6848 bp Feature: gene Location: 938764-939621 bp Feature: domain Description: dam Location: 938767-939544 bp Feature: domain Description: dam Location: 93 8767-93 9544 bp Feature: gene Location: 939618-942032 bp Feature: domain Description: Phage_GPA Location: 940182-941148 bp Feature: domain Description: Phage_GPA Location: 940182-941148 bp Feature: gene Location: 942508-943143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 942913-943144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 942913 -943 144 bp Feature: gene Location: 944231-944419 bp Feature: gene Location: 944430-944663 bp Feature: domain Description: DinI Location: 944472-944658 bp Feature: domain Description: DinI Location: 944472-944658 bp Feature: gene Location: 1275967-1277106 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1276150-1277050 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1276150-1277050 bp Feature: gene Location: 1277277-1277519 bp Feature: domain Description: DinI Location: 1277328-1277508 bp Feature: domain Description: DinI Location: 12773 28-1277508 bp Feature: gene Location: 1278137-1279624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1278542-1279232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1278542-127923 2 bp Feature: gene Location: 1279703-1280122 bp Feature: domain Description: PRK10276 Location: 1279706-1280117 bp Feature: domain Description: PRK10276 Location: 1279706-1280117 bp Feature: gene Location: 1280125-1281390 bp Feature: domain Description: umuC Location: 1280128-1281388 bp Feature: domain Description: umuC Location: 1280128-12813 88 bp Feature: gene Location: 1453586-1454290 bp Feature: domain Description: Rve Location: 1453589-1454234 bp Feature: domain Description: Rve Location: 1453 589-145423 4 bp Feature: gene Location: 1454356-1454805 bp Feature: domain Description: PinE Location: 1454365-1454797 bp Feature: domain Description: PinE Location: 14543 65-1454797 bp Feature: gene Location: 1456200-1457687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456605-1457295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456605-1457295 bp Feature: gene Location: 1457680-1458186 bp Feature: domain Description: PRK10276 Location: 1457770-1458181 bp Feature: domain Description: PRK10276 Location: 1457770-1458181 bp Feature: gene Location: 1458188-1459453 bp Feature: domain Description: umuC Location: 1458191-1459451 bp Feature: domain Description: umuC Location: 1458191-1459451 bp Feature: gene Location: 2839198-2840256 bp Feature: domain Description: YccC Location: 2839204-2840242 bp Feature: domain Description: YccC Location: 283 9204-2840242 bp Feature: gene Location: 2840355-2840828 bp Feature: domain Description: PRK10016 Location: 2840358-2840817 bp Feature: domain Description: PRK10016 Location: 28403 58-2840817 bp Feature: gene Location: 2840910-2842397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2841315-2842005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28413 15-2842005 bp Feature: gene Location: 2842915-2844078 bp Feature: domain Description: dacD Location: 2842918-2844073 bp Feature: domain Description: dacD Location: 2842918-2844073 bp Feature: gene Location: 2844259-2845683 bp Feature: domain Description: SbcB Location: 2844265-2845681 bp Feature: domain Description: SbcB Location: 2844265-2845681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609), Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736690.1 Klebsiella pneumoniae BWH 47 genomic scaffold aeeaM-supercont1.5, whole genome shotgun sequence (92867 bp)
Overview 1 RT 1: 80497-84256 bp Neighborhood of RT #1 [80497, 84256] RVT-GII Feature: gene Location: 80497-80976 bp Feature: gene Location: 81116-81223 bp Feature: gene Location: 81804-83291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82209-82899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82209-82899 bp Feature: gene Location: 83365-83946 bp Feature: gene Location: 83963-84256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII