myRT

myRT report for GCA_000693135.1_Kleb_pneu_CHS_02_V1

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Seq: KK736710.1 Klebsiella pneumoniae CHS 02 genomic scaffold aeeaz-supercont1.3, whole genome shotgun sequence (512147 bp)
Overview 1 RT 1: 66-5931 bp Neighborhood of RT #1 [66, 5933] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 66-770 bp Feature: domain Description: Rve Location: 69-714 bp Feature: domain Description: Rve Location: 69-71 4 bp Feature: gene Location: 836-1285 bp Feature: domain Description: PinE Location: 845-1277 bp Feature: domain Description: PinE Location: 845-1 277 bp Feature: gene Location: 2680-4167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3085-3775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3085-3775 bp Feature: gene Location: 4160-4666 bp Feature: domain Description: PRK10276 Location: 4250-4661 bp Feature: domain Description: PRK1 0276 Location: 4250-4661 bp Feature: gene Location: 4668-5933 bp Feature: domain Description: umuC Location: 4671-5931 bp Feature: domain Description: umuC Location: 4671 -5931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), PinE (COG1961)

Seq: KK736712.1 Klebsiella pneumoniae CHS 02 genomic scaffold aeeaz-supercont1.5, whole genome shotgun sequence (123206 bp)
Overview 1 RT 1: 115804-120795 bp Neighborhood of RT #1 [115804, 120800] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 115804-116229 bp Feature: domain Description: Antirestrict Location: 115939-116227 bp Feature: domain Description: Antirestrict Location: 115939-1162 2 7 bp Feature: gene Location: 116750-116980 bp Feature: gene Location: 117214-118701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117619-118309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117619-118309 bp Feature: gene Location: 119104-119529 bp Feature: domain Description: PRK10276 Location: 119107-119515 bp Feature: domain Description: PRK102 76 Location: 119107-119515 bp Feature: gene Location: 119529-120800 bp Feature: domain Description: umuC Location: 119532-120795 bp Feature: domain Description: umuC Location: 119532 -12 0795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK736709.1 Klebsiella pneumoniae CHS 02 genomic scaffold aeeaz-supercont1.2, whole genome shotgun sequence (1548918 bp)
Overview 1 RT 1: 585480-588887 bp 2 RT 2: 1028122-1033727 bp 3 RT 3: 1371410-1376828 bp Neighborhood of RT #1 [585480, 588988] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1028122, 1033753] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1371410, 1376830] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 585480-586211 bp Feature: domain Description: Laminin_G_3 Location: 585801-586155 bp Feature: domain Description: Laminin_G_3 Location: 585801-586155 bp Feature: gene Location: 586208-586417 bp Feature: gene Location: 586867-588354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587272-587962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587272-587962 bp Feature: gene Location: 588432-588671 bp Feature: gene Location: 588671-588988 bp Feature: domain Description: PRK10276 Location: 588677-588791 bp Feature: domain Description: PRK10276 Location: 588677-588791 bp Feature: domain Description: PRK10276 Location: 588818-588887 bp Feature: domain Description: PRK10276 Location: 588818-588887 bp Feature: gene Location: 1028122-1028685 bp Feature: domain Description: YbjK Location: 1028128-1028665 bp Feature: domain Description: YbjK Location: 1028128-1028665 bp Feature: gene Location: 1028808-1029860 bp Feature: domain Description: int Location: 1028811-1029810 bp Feature: domain Description: int Location: 1028811-1029810 bp Feature: gene Location: 1030276-1031763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030681-1031371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 0681-103 13 71 bp Feature: gene Location: 1031862-1032806 bp Feature: gene Location: 1032818-1033753 bp Feature: domain Description: Phage_CI_repr Location: 1032902-1033085 bp Feature: domain Description: Phage_CI_repr Location: 103 2902-103 3 085 bp Feature: domain Description: Phage_CI_repr Location: 1033214-1033406 bp Feature: domain Description: Phage_CI_repr Location: 103 3 214-103 3 406 bp Feature: domain Description: Phage_CI_C Location: 1033433-1033727 bp Feature: domain Description: Phage_CI_C Location: 103 3 43 3 -103 3 727 bp Feature: gene Location: 1371410-1372549 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1371593-1372493 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 71593 -13 72493 bp Feature: gene Location: 1372720-1372962 bp Feature: domain Description: DinI Location: 1372771-1372951 bp Feature: domain Description: DinI Location: 13 72771-13 72951 bp Feature: gene Location: 1373577-1375064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373982-1374672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 73 982-13 74672 bp Feature: gene Location: 1375143-1375562 bp Feature: domain Description: PRK10276 Location: 1375146-1375557 bp Feature: domain Description: PRK10276 Location: 13 75146-13 75557 bp Feature: gene Location: 1375565-1376830 bp Feature: domain Description: umuC Location: 1375568-1376828 bp Feature: domain Description: umuC Location: 13 75568-13 76828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK736708.1 Klebsiella pneumoniae CHS 02 genomic scaffold aeeaz-supercont1.1, whole genome shotgun sequence (3036212 bp)
Overview 1 RT 1: 884700-891183 bp Neighborhood of RT #1 [884700, 891185] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884700-885758 bp Feature: domain Description: YccC Location: 884706-885744 bp Feature: domain Description: YccC Location: 884 706-88574 4 bp Feature: gene Location: 885857-886330 bp Feature: domain Description: PRK10016 Location: 885860-886319 bp Feature: domain Description: PRK10016 Location: 885860-886319 bp Feature: gene Location: 886412-887899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886817-887507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886817-887507 bp Feature: gene Location: 888417-889580 bp Feature: domain Description: dacD Location: 888420-889575 bp Feature: domain Description: dacD Location: 8884 20-889575 bp Feature: gene Location: 889761-891185 bp Feature: domain Description: SbcB Location: 889767-891183 bp Feature: domain Description: SbcB Location: 889767-891183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)