myRT

myRT report for GCA_000693155.1_Kleb_pneu_CHS_03_V1

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Seq: KK736734.1 Klebsiella pneumoniae CHS 03 genomic scaffold aeeaO-supercont1.1, whole genome shotgun sequence (3479455 bp)
Overview 1 RT 1: 587464-590871 bp 2 RT 2: 1030106-1035711 bp 3 RT 3: 1373346-1378764 bp 4 RT 4: 1550962-1556827 bp 5 RT 5: 2927099-2933582 bp Neighborhood of RT #1 [587464, 590972] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1030106, 1035737] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1373346, 1378766] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1550962, 1556829] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2927099, 2933584] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 587464-588195 bp Feature: domain Description: Laminin_G_3 Location: 587785-588139 bp Feature: domain Description: Laminin_G_3 Location: 587785-5881 39 bp Feature: gene Location: 588192-588401 bp Feature: gene Location: 588851-590338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589256-589946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589256-589946 bp Feature: gene Location: 590416-590655 bp Feature: gene Location: 590655-590972 bp Feature: domain Description: PRK10276 Location: 590661-590775 bp Feature: domain Description: PRK1 0276 Location: 590661 -590775 bp Feature: domain Description: PRK10276 Location: 590802-590871 bp Feature: domain Description: PRK1 0276 Location: 590802-590871 bp Feature: gene Location: 1030106-1030669 bp Feature: domain Description: YbjK Location: 1030112-1030649 bp Feature: domain Description: YbjK Location: 1 0301 1 2-1 030649 bp Feature: gene Location: 1030792-1031844 bp Feature: domain Description: int Location: 1030795-1031794 bp Feature: domain Description: int Location: 1 030795-1 031 794 bp Feature: gene Location: 1032260-1033747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032665-1033355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 032665-1 033355 bp Feature: gene Location: 1033846-1034790 bp Feature: gene Location: 1034802-1035737 bp Feature: domain Description: Phage_CI_repr Location: 1034886-1035069 bp Feature: domain Description: Phage_CI_repr Location: 1 034886-1 035069 bp Feature: domain Description: Phage_CI_repr Location: 1035198-1035390 bp Feature: domain Description: Phage_CI_repr Location: 1 0351 98-1 035390 bp Feature: domain Description: Phage_CI_C Location: 1035417-1035711 bp Feature: domain Description: Phage_CI_C Location: 1 03541 7-1 03571 1 bp Feature: gene Location: 1373346-1374485 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1373529-1374429 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 373529-1 374429 bp Feature: gene Location: 1374656-1374898 bp Feature: domain Description: DinI Location: 1374707-1374887 bp Feature: domain Description: DinI Location: 1 374707-1 374887 bp Feature: gene Location: 1375513-1377000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375918-1376608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 37591 8-1 376608 bp Feature: gene Location: 1377079-1377498 bp Feature: domain Description: PRK10276 Location: 1377082-1377493 bp Feature: domain Description: PRK1 0276 Location: 1 377082-1 377493 bp Feature: gene Location: 1377501-1378766 bp Feature: domain Description: umuC Location: 1377504-1378764 bp Feature: domain Description: umuC Location: 1 377504-1 378764 bp Feature: gene Location: 1550962-1551666 bp Feature: domain Description: Rve Location: 1550965-1551610 bp Feature: domain Description: Rve Location: 1 550965-1 551 61 0 bp Feature: gene Location: 1551732-1552181 bp Feature: domain Description: PinE Location: 1551741-1552173 bp Feature: domain Description: PinE Location: 1 551 741 -1 5521 73 bp Feature: gene Location: 1553576-1555063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1553981-1554671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 553981 -1 554671 bp Feature: gene Location: 1555056-1555562 bp Feature: domain Description: PRK10276 Location: 1555146-1555557 bp Feature: domain Description: PRK1 0276 Location: 1 5551 46-1 555557 bp Feature: gene Location: 1555564-1556829 bp Feature: domain Description: umuC Location: 1555567-1556827 bp Feature: domain Description: umuC Location: 1 555567-1 556827 bp Feature: gene Location: 2927099-2928157 bp Feature: domain Description: YccC Location: 2927105-2928143 bp Feature: domain Description: YccC Location: 29271 05-29281 43 bp Feature: gene Location: 2928256-2928729 bp Feature: domain Description: PRK10016 Location: 2928259-2928718 bp Feature: domain Description: PRK1 001 6 Location: 2928259-292871 8 bp Feature: gene Location: 2928811-2930298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2929216-2929906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292921 6-2929906 bp Feature: gene Location: 2930816-2931979 bp Feature: domain Description: dacD Location: 2930819-2931974 bp Feature: domain Description: dacD Location: 293081 9-2931 974 bp Feature: gene Location: 2932160-2933584 bp Feature: domain Description: SbcB Location: 2932166-2933582 bp Feature: domain Description: SbcB Location: 29321 66-2933582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736739.1 Klebsiella pneumoniae CHS 03 genomic scaffold aeeaO-supercont1.6, whole genome shotgun sequence (66947 bp)
Overview 1 RT 1: 63461-66655 bp Neighborhood of RT #1 [63461, 66947] umuC PRK10276 RVT-GII Feature: gene Location: 63461-64732 bp Feature: domain Description: umuC Location: 63464-64727 bp Feature: domain Description: umuC Location: 63464-6472 7 bp Feature: gene Location: 64732-65157 bp Feature: domain Description: PRK10276 Location: 64735-65143 bp Feature: domain Description: PRK102 76 Location: 64735-65143 bp Feature: gene Location: 65560-66947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65965-66655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65965-66655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII