myRT

myRT report for GCA_000693195.1_Kleb_pneu_CHS_06_V1

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Seq: KK736760.1 Klebsiella pneumoniae CHS 06 genomic scaffold aeebk-supercont1.1, whole genome shotgun sequence (3504328 bp)
Overview 1 RT 1: 1-5749 bp 2 RT 2: 1388700-1395183 bp Neighborhood of RT #1 [1, 5751] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1388700, 1395185] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1-588 bp Feature: domain Description: Rve Location: 4-532 bp Feature: domain Description: Rve Location: 4-532 bp Feature: gene Location: 654-1103 bp Feature: domain Description: PinE Location: 663-1095 bp Feature: domain Description: PinE Location: 663-1 095 bp Feature: gene Location: 2498-3985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2903-3593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2903-3593 bp Feature: gene Location: 3978-4484 bp Feature: domain Description: PRK10276 Location: 4068-4479 bp Feature: domain Description: PRK1 0276 Location: 4068-4479 bp Feature: gene Location: 4486-5751 bp Feature: domain Description: umuC Location: 4489-5749 bp Feature: domain Description: umuC Location: 4489-5749 bp Feature: gene Location: 1388700-1389758 bp Feature: domain Description: YccC Location: 1388706-1389744 bp Feature: domain Description: YccC Location: 1 388706-1 389744 bp Feature: gene Location: 1389857-1390330 bp Feature: domain Description: PRK10016 Location: 1389860-1390319 bp Feature: domain Description: PRK1 001 6 Location: 1 389860-1 39031 9 bp Feature: gene Location: 1390412-1391899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1390817-1391507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39081 7-1 391 507 bp Feature: gene Location: 1392417-1393580 bp Feature: domain Description: dacD Location: 1392420-1393575 bp Feature: domain Description: dacD Location: 1 392420-1 393575 bp Feature: gene Location: 1393761-1395185 bp Feature: domain Description: SbcB Location: 1393767-1395183 bp Feature: domain Description: SbcB Location: 1 393767-1 3951 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736764.1 Klebsiella pneumoniae CHS 06 genomic scaffold aeebk-supercont1.5, whole genome shotgun sequence (138356 bp)
Overview 1 RT 1: 134870-138064 bp Neighborhood of RT #1 [134870, 138356] umuC PRK10276 RVT-GII Feature: gene Location: 134870-136141 bp Feature: domain Description: umuC Location: 134873-136136 bp Feature: domain Description: umuC Location: 134873-136136 bp Feature: gene Location: 136141-136566 bp Feature: domain Description: PRK10276 Location: 136144-136552 bp Feature: domain Description: PRK102 76 Location: 136144-136552 bp Feature: gene Location: 136969-138356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137374-138064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137374-138064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK736761.1 Klebsiella pneumoniae CHS 06 genomic scaffold aeebk-supercont1.2, whole genome shotgun sequence (1312564 bp)
Overview 1 RT 1: 329111-332518 bp 2 RT 2: 771753-777358 bp 3 RT 3: 1115611-1121029 bp Neighborhood of RT #1 [329111, 332619] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [771753, 777384] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1115611, 1121031] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 329111-329842 bp Feature: domain Description: Laminin_G_3 Location: 329432-329786 bp Feature: domain Description: Laminin_G_3 Location: 3 2943 2-3 29786 bp Feature: gene Location: 329839-330048 bp Feature: gene Location: 330498-331985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330903-331593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 0903 -3 3 1593 bp Feature: gene Location: 332063-332302 bp Feature: gene Location: 332302-332619 bp Feature: domain Description: PRK10276 Location: 332308-332422 bp Feature: domain Description: PRK10276 Location: 3 3 23 08-3 3 2422 bp Feature: domain Description: PRK10276 Location: 332449-332518 bp Feature: domain Description: PRK10276 Location: 3 3 2449-3 3 2518 bp Feature: gene Location: 771753-772316 bp Feature: domain Description: YbjK Location: 771759-772296 bp Feature: domain Description: YbjK Location: 771759-772296 bp Feature: gene Location: 772439-773491 bp Feature: domain Description: int Location: 772442-773441 bp Feature: domain Description: int Location: 772442-773 441 bp Feature: gene Location: 773907-775394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774312-775002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7743 12-775002 bp Feature: gene Location: 775493-776437 bp Feature: gene Location: 776449-777384 bp Feature: domain Description: Phage_CI_repr Location: 776533-776716 bp Feature: domain Description: Phage_CI_repr Location: 77653 3 -776716 bp Feature: domain Description: Phage_CI_repr Location: 776845-777037 bp Feature: domain Description: Phage_CI_repr Location: 776845-77703 7 bp Feature: domain Description: Phage_CI_C Location: 777064-777358 bp Feature: domain Description: Phage_CI_C Location: 777064-7773 58 bp Feature: gene Location: 1115611-1116750 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115794-1116694 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115794-1116694 bp Feature: gene Location: 1116921-1117163 bp Feature: domain Description: DinI Location: 1116972-1117152 bp Feature: domain Description: DinI Location: 1116972-1117152 bp Feature: gene Location: 1117778-1119265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118183-1118873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118183 -1118873 bp Feature: gene Location: 1119344-1119763 bp Feature: domain Description: PRK10276 Location: 1119347-1119758 bp Feature: domain Description: PRK10276 Location: 11193 47-1119758 bp Feature: gene Location: 1119766-1121031 bp Feature: domain Description: umuC Location: 1119769-1121029 bp Feature: domain Description: umuC Location: 1119769-1121029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)