myRT

myRT report for GCA_000693215.1_Kleb_pneu_CHS_07_V1

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Seq: KK736770.1 Klebsiella pneumoniae CHS 07 genomic scaffold aedYK-supercont1.1, whole genome shotgun sequence (4052038 bp)
Overview 1 RT 1: 329328-332735 bp 2 RT 2: 771970-777575 bp 3 RT 3: 1115248-1120666 bp 4 RT 4: 1306640-1312505 bp 5 RT 5: 2646071-2652554 bp Neighborhood of RT #1 [329328, 332836] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [771970, 777601] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1115248, 1120668] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1306640, 1312507] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2646071, 2652556] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 329328-330059 bp Feature: domain Description: Laminin_G_3 Location: 329649-330003 bp Feature: domain Description: Laminin_G_3 Location: 329649-330003 bp Feature: gene Location: 330056-330265 bp Feature: gene Location: 330715-332202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331120-331810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 1 20-331 81 0 bp Feature: gene Location: 332280-332519 bp Feature: gene Location: 332519-332836 bp Feature: domain Description: PRK10276 Location: 332525-332639 bp Feature: domain Description: PRK1 0276 Location: 332525-332639 bp Feature: domain Description: PRK10276 Location: 332666-332735 bp Feature: domain Description: PRK1 0276 Location: 332666-332735 bp Feature: gene Location: 771970-772533 bp Feature: domain Description: YbjK Location: 771976-772513 bp Feature: domain Description: YbjK Location: 771 976-77251 3 bp Feature: gene Location: 772656-773708 bp Feature: domain Description: int Location: 772659-773658 bp Feature: domain Description: int Location: 772659-773658 bp Feature: gene Location: 774124-775611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774529-775219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774529-77521 9 bp Feature: gene Location: 775710-776654 bp Feature: gene Location: 776666-777601 bp Feature: domain Description: Phage_CI_repr Location: 776750-776933 bp Feature: domain Description: Phage_CI_repr Location: 776750-776933 bp Feature: domain Description: Phage_CI_repr Location: 777062-777254 bp Feature: domain Description: Phage_CI_repr Location: 777062-777254 bp Feature: domain Description: Phage_CI_C Location: 777281-777575 bp Feature: domain Description: Phage_CI_C Location: 777281 -777575 bp Feature: gene Location: 1115248-1116387 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115431-1116331 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 1 1 5431 -1 1 1 6331 bp Feature: gene Location: 1116558-1116800 bp Feature: domain Description: DinI Location: 1116609-1116789 bp Feature: domain Description: DinI Location: 1 1 1 6609-1 1 1 6789 bp Feature: gene Location: 1117415-1118902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117820-1118510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 7820-1 1 1 851 0 bp Feature: gene Location: 1118981-1119400 bp Feature: domain Description: PRK10276 Location: 1118984-1119395 bp Feature: domain Description: PRK1 0276 Location: 1 1 1 8984-1 1 1 9395 bp Feature: gene Location: 1119403-1120668 bp Feature: domain Description: umuC Location: 1119406-1120666 bp Feature: domain Description: umuC Location: 1 1 1 9406-1 1 20666 bp Feature: gene Location: 1306640-1307344 bp Feature: domain Description: Rve Location: 1306643-1307288 bp Feature: domain Description: Rve Location: 1 306643-1 307288 bp Feature: gene Location: 1307410-1307859 bp Feature: domain Description: PinE Location: 1307419-1307851 bp Feature: domain Description: PinE Location: 1 30741 9-1 307851 bp Feature: gene Location: 1309254-1310741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1309659-1310349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 309659-1 31 0349 bp Feature: gene Location: 1310734-1311240 bp Feature: domain Description: PRK10276 Location: 1310824-1311235 bp Feature: domain Description: PRK1 0276 Location: 1 31 0824-1 31 1 235 bp Feature: gene Location: 1311242-1312507 bp Feature: domain Description: umuC Location: 1311245-1312505 bp Feature: domain Description: umuC Location: 1 31 1 245-1 31 2505 bp Feature: gene Location: 2646071-2647129 bp Feature: domain Description: YccC Location: 2646077-2647115 bp Feature: domain Description: YccC Location: 2646077-26471 1 5 bp Feature: gene Location: 2647228-2647701 bp Feature: domain Description: PRK10016 Location: 2647231-2647690 bp Feature: domain Description: PRK1 001 6 Location: 2647231 -2647690 bp Feature: gene Location: 2647783-2649270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2648188-2648878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26481 88-2648878 bp Feature: gene Location: 2649788-2650951 bp Feature: domain Description: dacD Location: 2649791-2650946 bp Feature: domain Description: dacD Location: 2649791 -2650946 bp Feature: gene Location: 2651132-2652556 bp Feature: domain Description: SbcB Location: 2651138-2652554 bp Feature: domain Description: SbcB Location: 2651 1 38-2652554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736772.1 Klebsiella pneumoniae CHS 07 genomic scaffold aedYK-supercont1.3, whole genome shotgun sequence (309620 bp)
Overview 1 RT 1: 92703-97694 bp Neighborhood of RT #1 [92703, 97699] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 92703-93128 bp Feature: domain Description: Antirestrict Location: 92838-93126 bp Feature: domain Description: Antirestrict Location: 92 838-9312 6 bp Feature: gene Location: 93649-93879 bp Feature: gene Location: 94113-95600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94518-95208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94518-952 08 bp Feature: gene Location: 96003-96428 bp Feature: domain Description: PRK10276 Location: 96006-96414 bp Feature: domain Description: PRK102 76 Location: 96006-96414 bp Feature: gene Location: 96428-97699 bp Feature: domain Description: umuC Location: 96431-97694 bp Feature: domain Description: umuC Location: 96431-97694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)