myRT

myRT report for GCA_000693235.1_Kleb_pneu_CHS_09_V1

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Seq: KK736776.1 Klebsiella pneumoniae CHS 09 genomic scaffold aeeal-supercont1.1, whole genome shotgun sequence (5024018 bp)
Overview 1 RT 1: 585184-588591 bp 2 RT 2: 1026812-1032417 bp 3 RT 3: 1370328-1375746 bp 4 RT 4: 1554344-1559879 bp 5 RT 5: 2917579-2924062 bp Neighborhood of RT #1 [585184, 588692] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026812, 1032443] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370328, 1375748] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554344, 1559881] DDE_Tnp_IS240 PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2917579, 2924064] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 585184-585915 bp Feature: domain Description: Laminin_G_3 Location: 585505-585859 bp Feature: domain Description: Laminin_G_3 Location: 585505-585859 bp Feature: gene Location: 585912-586121 bp Feature: gene Location: 586571-588058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586976-587666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586976-587666 bp Feature: gene Location: 588136-588375 bp Feature: gene Location: 588375-588692 bp Feature: domain Description: PRK10276 Location: 588381-588495 bp Feature: domain Description: PRK1 0276 Location: 588381 -588495 bp Feature: domain Description: PRK10276 Location: 588522-588591 bp Feature: domain Description: PRK1 0276 Location: 588522-588591 bp Feature: gene Location: 1026812-1027375 bp Feature: domain Description: YbjK Location: 1026818-1027355 bp Feature: domain Description: YbjK Location: 1 02681 8-1 027355 bp Feature: gene Location: 1027498-1028550 bp Feature: domain Description: int Location: 1027501-1028500 bp Feature: domain Description: int Location: 1 027501 -1 028500 bp Feature: gene Location: 1028966-1030453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029371-1030061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029371 -1 030061 bp Feature: gene Location: 1030552-1031496 bp Feature: gene Location: 1031508-1032443 bp Feature: domain Description: Phage_CI_repr Location: 1031592-1031775 bp Feature: domain Description: Phage_CI_repr Location: 1 031 592-1 031 775 bp Feature: domain Description: Phage_CI_repr Location: 1031904-1032096 bp Feature: domain Description: Phage_CI_repr Location: 1 031 904-1 032096 bp Feature: domain Description: Phage_CI_C Location: 1032123-1032417 bp Feature: domain Description: Phage_CI_C Location: 1 0321 23-1 03241 7 bp Feature: gene Location: 1370328-1371467 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370511-1371411 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 37051 1 -1 371 41 1 bp Feature: gene Location: 1371638-1371880 bp Feature: domain Description: DinI Location: 1371689-1371869 bp Feature: domain Description: DinI Location: 1 371 689-1 371 869 bp Feature: gene Location: 1372495-1373982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372900-1373590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372900-1 373590 bp Feature: gene Location: 1374061-1374480 bp Feature: domain Description: PRK10276 Location: 1374064-1374475 bp Feature: domain Description: PRK1 0276 Location: 1 374064-1 374475 bp Feature: gene Location: 1374483-1375748 bp Feature: domain Description: umuC Location: 1374486-1375746 bp Feature: domain Description: umuC Location: 1 374486-1 375746 bp Feature: gene Location: 1554344-1554718 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1554347-1554650 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1 554347-1 554650 bp Feature: gene Location: 1554784-1555233 bp Feature: domain Description: PinE Location: 1554793-1555225 bp Feature: domain Description: PinE Location: 1 554793-1 555225 bp Feature: gene Location: 1556628-1558115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557033-1557723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 557033-1 557723 bp Feature: gene Location: 1558108-1558614 bp Feature: domain Description: PRK10276 Location: 1558198-1558609 bp Feature: domain Description: PRK1 0276 Location: 1 5581 98-1 558609 bp Feature: gene Location: 1558616-1559881 bp Feature: domain Description: umuC Location: 1558619-1559879 bp Feature: domain Description: umuC Location: 1 55861 9-1 559879 bp Feature: gene Location: 2917579-2918637 bp Feature: domain Description: YccC Location: 2917585-2918623 bp Feature: domain Description: YccC Location: 291 7585-291 8623 bp Feature: gene Location: 2918736-2919209 bp Feature: domain Description: PRK10016 Location: 2918739-2919198 bp Feature: domain Description: PRK1 001 6 Location: 291 8739-291 91 98 bp Feature: gene Location: 2919291-2920778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2919696-2920386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 9696-2920386 bp Feature: gene Location: 2921296-2922459 bp Feature: domain Description: dacD Location: 2921299-2922454 bp Feature: domain Description: dacD Location: 2921 299-2922454 bp Feature: gene Location: 2922640-2924064 bp Feature: domain Description: SbcB Location: 2922646-2924062 bp Feature: domain Description: SbcB Location: 2922646-2924062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
DDE_Tnp_IS240 (pfam13610), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736778.1 Klebsiella pneumoniae CHS 09 genomic scaffold aeeal-supercont1.3, whole genome shotgun sequence (159070 bp)
Overview 1 RT 1: 81081-86784 bp Neighborhood of RT #1 [81081, 86789] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 81081-81506 bp Feature: domain Description: Antirestrict Location: 81216-81504 bp Feature: domain Description: Antirestrict Location: 812 16-81504 bp Feature: gene Location: 82027-82257 bp Feature: gene Location: 83203-84690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83608-84298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83608-842 98 bp Feature: gene Location: 85093-85518 bp Feature: domain Description: PRK10276 Location: 85096-85504 bp Feature: domain Description: PRK102 76 Location: 85096-85504 bp Feature: gene Location: 85518-86789 bp Feature: domain Description: umuC Location: 85521-86784 bp Feature: domain Description: umuC Location: 8552 1-86784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)