myRT

myRT report for GCA_000693255.1_Kleb_pneu_CHS_11_V1

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Seq: KK736787.1 Klebsiella pneumoniae CHS 11 genomic scaffold aedYQ-supercont1.2, whole genome shotgun sequence (1232140 bp)
Overview 1 RT 1: 268279-271686 bp 2 RT 2: 710921-716526 bp 3 RT 3: 1054563-1059981 bp Neighborhood of RT #1 [268279, 271787] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [710921, 716552] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1054563, 1059983] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 268279-269010 bp Feature: domain Description: Laminin_G_3 Location: 268600-268954 bp Feature: domain Description: Laminin_G_3 Location: 268600-268954 bp Feature: gene Location: 269007-269216 bp Feature: gene Location: 269666-271153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270071-270761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270071 -270761 bp Feature: gene Location: 271231-271470 bp Feature: gene Location: 271470-271787 bp Feature: domain Description: PRK10276 Location: 271476-271590 bp Feature: domain Description: PRK1 0276 Location: 271 476-271 590 bp Feature: domain Description: PRK10276 Location: 271617-271686 bp Feature: domain Description: PRK1 0276 Location: 271 61 7-271 686 bp Feature: gene Location: 710921-711484 bp Feature: domain Description: YbjK Location: 710927-711464 bp Feature: domain Description: YbjK Location: 71 0927-71 1 464 bp Feature: gene Location: 711607-712659 bp Feature: domain Description: int Location: 711610-712609 bp Feature: domain Description: int Location: 71 1 61 0-71 2609 bp Feature: gene Location: 713075-714562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 713480-714170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 3480-71 41 70 bp Feature: gene Location: 714661-715605 bp Feature: gene Location: 715617-716552 bp Feature: domain Description: Phage_CI_repr Location: 715701-715884 bp Feature: domain Description: Phage_CI_repr Location: 71 5701 -71 5884 bp Feature: domain Description: Phage_CI_repr Location: 716013-716205 bp Feature: domain Description: Phage_CI_repr Location: 71 601 3-71 6205 bp Feature: domain Description: Phage_CI_C Location: 716232-716526 bp Feature: domain Description: Phage_CI_C Location: 71 6232-71 6526 bp Feature: gene Location: 1054563-1055702 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1054746-1055646 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 054746-1 055646 bp Feature: gene Location: 1055873-1056115 bp Feature: domain Description: DinI Location: 1055924-1056104 bp Feature: domain Description: DinI Location: 1 055924-1 0561 04 bp Feature: gene Location: 1056730-1058217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057135-1057825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0571 35-1 057825 bp Feature: gene Location: 1058296-1058715 bp Feature: domain Description: PRK10276 Location: 1058299-1058710 bp Feature: domain Description: PRK1 0276 Location: 1 058299-1 05871 0 bp Feature: gene Location: 1058718-1059983 bp Feature: domain Description: umuC Location: 1058721-1059981 bp Feature: domain Description: umuC Location: 1 058721 -1 059981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK736786.1 Klebsiella pneumoniae CHS 11 genomic scaffold aedYQ-supercont1.1, whole genome shotgun sequence (3985959 bp)
Overview 1 RT 1: 3142-9007 bp 2 RT 2: 1339349-1345832 bp Neighborhood of RT #1 [3142, 9009] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1339349, 1345834] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 3142-3846 bp Feature: domain Description: Rve Location: 3145-3790 bp Feature: domain Description: Rve Location: 3145-3790 bp Feature: gene Location: 3912-4361 bp Feature: domain Description: PinE Location: 3921-4353 bp Feature: domain Description: PinE Location: 392 1-4353 bp Feature: gene Location: 5756-7243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6161-6851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6161-6851 bp Feature: gene Location: 7236-7742 bp Feature: domain Description: PRK10276 Location: 7326-7737 bp Feature: domain Description: PRK102 76 Location: 732 6-7737 bp Feature: gene Location: 7744-9009 bp Feature: domain Description: umuC Location: 7747-9007 bp Feature: domain Description: umuC Location: 7747-9007 bp Feature: gene Location: 1339349-1340407 bp Feature: domain Description: YccC Location: 1339355-1340393 bp Feature: domain Description: YccC Location: 1339355-1340393 bp Feature: gene Location: 1340506-1340979 bp Feature: domain Description: PRK10016 Location: 1340509-1340968 bp Feature: domain Description: PRK10016 Location: 1340509-1340968 bp Feature: gene Location: 1341061-1342548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1341466-1342156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1341466-1342 156 bp Feature: gene Location: 1343066-1344229 bp Feature: domain Description: dacD Location: 1343069-1344224 bp Feature: domain Description: dacD Location: 1343069-13442 2 4 bp Feature: gene Location: 1344410-1345834 bp Feature: domain Description: SbcB Location: 1344416-1345832 bp Feature: domain Description: SbcB Location: 1344416-1345832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)