myRT

myRT report for GCA_000693275.1_Kleb_pneu_CHS_12_V1

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Seq: KK736799.1 Klebsiella pneumoniae CHS 12 genomic scaffold aedYR-supercont1.5, whole genome shotgun sequence (104090 bp)
Overview 1 RT 1: 55344-60335 bp Neighborhood of RT #1 [55344, 60340] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 55344-55769 bp Feature: domain Description: Antirestrict Location: 55479-55767 bp Feature: domain Description: Antirestrict Location: 55479-55767 bp Feature: gene Location: 56290-56520 bp Feature: gene Location: 56754-58241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57159-57849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571 59-57849 bp Feature: gene Location: 58644-59069 bp Feature: domain Description: PRK10276 Location: 58647-59055 bp Feature: domain Description: PRK1 0276 Location: 58647-59055 bp Feature: gene Location: 59069-60340 bp Feature: domain Description: umuC Location: 59072-60335 bp Feature: domain Description: umuC Location: 59072-60335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK736795.1 Klebsiella pneumoniae CHS 12 genomic scaffold aedYR-supercont1.1, whole genome shotgun sequence (3481534 bp)
Overview 1 RT 1: 590009-593416 bp 2 RT 2: 1032651-1038256 bp 3 RT 3: 1375929-1381347 bp 4 RT 4: 1560290-1565579 bp 5 RT 5: 2929178-2935661 bp Neighborhood of RT #1 [590009, 593517] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1032651, 1038282] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1375929, 1381349] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1560290, 1565581] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2929178, 2935663] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 590009-590740 bp Feature: domain Description: Laminin_G_3 Location: 590330-590684 bp Feature: domain Description: Laminin_G_3 Location: 590330-590684 bp Feature: gene Location: 590737-590946 bp Feature: gene Location: 591396-592883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591801-592491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591801-592 491 bp Feature: gene Location: 592961-593200 bp Feature: gene Location: 593200-593517 bp Feature: domain Description: PRK10276 Location: 593206-593320 bp Feature: domain Description: PRK102 76 Location: 5932 06-59332 0 bp Feature: domain Description: PRK10276 Location: 593347-593416 bp Feature: domain Description: PRK102 76 Location: 593347-593416 bp Feature: gene Location: 1032651-1033214 bp Feature: domain Description: YbjK Location: 1032657-1033194 bp Feature: domain Description: YbjK Location: 1032 657-1033194 bp Feature: gene Location: 1033337-1034389 bp Feature: domain Description: int Location: 1033340-1034339 bp Feature: domain Description: int Location: 1033340-1034339 bp Feature: gene Location: 1034805-1036292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035210-1035900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10352 10-1035900 bp Feature: gene Location: 1036391-1037335 bp Feature: gene Location: 1037347-1038282 bp Feature: domain Description: Phage_CI_repr Location: 1037431-1037614 bp Feature: domain Description: Phage_CI_repr Location: 1037431-1037614 bp Feature: domain Description: Phage_CI_repr Location: 1037743-1037935 bp Feature: domain Description: Phage_CI_repr Location: 1037743-1037935 bp Feature: domain Description: Phage_CI_C Location: 1037962-1038256 bp Feature: domain Description: Phage_CI_C Location: 1037962 -10382 56 bp Feature: gene Location: 1375929-1377068 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1376112-1377012 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1376112 -1377012 bp Feature: gene Location: 1377239-1377481 bp Feature: domain Description: DinI Location: 1377290-1377470 bp Feature: domain Description: DinI Location: 13772 90-1377470 bp Feature: gene Location: 1378096-1379583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378501-1379191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378501-1379191 bp Feature: gene Location: 1379662-1380081 bp Feature: domain Description: PRK10276 Location: 1379665-1380076 bp Feature: domain Description: PRK102 76 Location: 1379665-1380076 bp Feature: gene Location: 1380084-1381349 bp Feature: domain Description: umuC Location: 1380087-1381347 bp Feature: domain Description: umuC Location: 1380087-1381347 bp Feature: gene Location: 1560290-1560418 bp Feature: gene Location: 1560484-1560933 bp Feature: domain Description: PinE Location: 1560493-1560925 bp Feature: domain Description: PinE Location: 1560493-156092 5 bp Feature: gene Location: 1562328-1563815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1562733-1563423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1562 733-156342 3 bp Feature: gene Location: 1563808-1564314 bp Feature: domain Description: PRK10276 Location: 1563898-1564309 bp Feature: domain Description: PRK102 76 Location: 1563898-1564309 bp Feature: gene Location: 1564316-1565581 bp Feature: domain Description: umuC Location: 1564319-1565579 bp Feature: domain Description: umuC Location: 1564319-1565579 bp Feature: gene Location: 2929178-2930236 bp Feature: domain Description: YccC Location: 2929184-2930222 bp Feature: domain Description: YccC Location: 2 92 9184-2 9302 2 2 bp Feature: gene Location: 2930335-2930808 bp Feature: domain Description: PRK10016 Location: 2930338-2930797 bp Feature: domain Description: PRK10016 Location: 2 930338-2 930797 bp Feature: gene Location: 2930890-2932377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2931295-2931985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9312 95-2 931985 bp Feature: gene Location: 2932895-2934058 bp Feature: domain Description: dacD Location: 2932898-2934053 bp Feature: domain Description: dacD Location: 2 932 898-2 934053 bp Feature: gene Location: 2934239-2935663 bp Feature: domain Description: SbcB Location: 2934245-2935661 bp Feature: domain Description: SbcB Location: 2 9342 45-2 935661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)