myRT

myRT report for GCA_000693295.1_Kleb_pneu_CHS_13_V1

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Seq: KK736804.1 Klebsiella pneumoniae CHS 13 genomic scaffold aeeaf-supercont1.1, whole genome shotgun sequence (3494459 bp)
Overview 1 RT 1: 1-5051 bp 2 RT 2: 1385783-1392266 bp Neighborhood of RT #1 [1, 5053] PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1385783, 1392268] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1-405 bp Feature: domain Description: PinE Location: 7-397 bp Feature: domain Description: PinE Location: 7-397 bp Feature: gene Location: 1800-3287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205-2895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205-2895 bp Feature: gene Location: 3280-3786 bp Feature: domain Description: PRK10276 Location: 3370-3781 bp Feature: domain Description: PRK1 0276 Location: 3370-3781 bp Feature: gene Location: 3788-5053 bp Feature: domain Description: umuC Location: 3791-5051 bp Feature: domain Description: umuC Location: 3791 -5051 bp Feature: gene Location: 1385783-1386841 bp Feature: domain Description: YccC Location: 1385789-1386827 bp Feature: domain Description: YccC Location: 1 385789-1 386827 bp Feature: gene Location: 1386940-1387413 bp Feature: domain Description: PRK10016 Location: 1386943-1387402 bp Feature: domain Description: PRK1 001 6 Location: 1 386943-1 387402 bp Feature: gene Location: 1387495-1388982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1387900-1388590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 387900-1 388590 bp Feature: gene Location: 1389500-1390663 bp Feature: domain Description: dacD Location: 1389503-1390658 bp Feature: domain Description: dacD Location: 1 389503-1 390658 bp Feature: gene Location: 1390844-1392268 bp Feature: domain Description: SbcB Location: 1390850-1392266 bp Feature: domain Description: SbcB Location: 1 390850-1 392266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736805.1 Klebsiella pneumoniae CHS 13 genomic scaffold aeeaf-supercont1.2, whole genome shotgun sequence (1297512 bp)
Overview 1 RT 1: 329324-332731 bp 2 RT 2: 771966-777571 bp 3 RT 3: 1115062-1120480 bp Neighborhood of RT #1 [329324, 332832] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [771966, 777597] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1115062, 1120482] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 329324-330055 bp Feature: domain Description: Laminin_G_3 Location: 329645-329999 bp Feature: domain Description: Laminin_G_3 Location: 32 9645-32 9999 bp Feature: gene Location: 330052-330261 bp Feature: gene Location: 330711-332198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331116-331806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331116-331806 bp Feature: gene Location: 332276-332515 bp Feature: gene Location: 332515-332832 bp Feature: domain Description: PRK10276 Location: 332521-332635 bp Feature: domain Description: PRK102 76 Location: 332 52 1-332 635 bp Feature: domain Description: PRK10276 Location: 332662-332731 bp Feature: domain Description: PRK102 76 Location: 332 662 -332 731 bp Feature: gene Location: 771966-772529 bp Feature: domain Description: YbjK Location: 771972-772509 bp Feature: domain Description: YbjK Location: 771972 -772 509 bp Feature: gene Location: 772652-773704 bp Feature: domain Description: int Location: 772655-773654 bp Feature: domain Description: int Location: 772 655-773654 bp Feature: gene Location: 774120-775607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774525-775215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77452 5-7752 15 bp Feature: gene Location: 775706-776650 bp Feature: gene Location: 776662-777597 bp Feature: domain Description: Phage_CI_repr Location: 776746-776929 bp Feature: domain Description: Phage_CI_repr Location: 776746-77692 9 bp Feature: domain Description: Phage_CI_repr Location: 777058-777250 bp Feature: domain Description: Phage_CI_repr Location: 777058-7772 50 bp Feature: domain Description: Phage_CI_C Location: 777277-777571 bp Feature: domain Description: Phage_CI_C Location: 7772 77-777571 bp Feature: gene Location: 1115062-1116201 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115245-1116145 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 11152 45-1116145 bp Feature: gene Location: 1116372-1116614 bp Feature: domain Description: DinI Location: 1116423-1116603 bp Feature: domain Description: DinI Location: 111642 3-1116603 bp Feature: gene Location: 1117229-1118716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117634-1118324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117634-111832 4 bp Feature: gene Location: 1118795-1119214 bp Feature: domain Description: PRK10276 Location: 1118798-1119209 bp Feature: domain Description: PRK102 76 Location: 1118798-11192 09 bp Feature: gene Location: 1119217-1120482 bp Feature: domain Description: umuC Location: 1119220-1120480 bp Feature: domain Description: umuC Location: 11192 2 0-112 0480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK736808.1 Klebsiella pneumoniae CHS 13 genomic scaffold aeeaf-supercont1.5, whole genome shotgun sequence (210891 bp)
Overview 1 RT 1: 89241-94232 bp Neighborhood of RT #1 [89241, 94237] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 89241-89666 bp Feature: domain Description: Antirestrict Location: 89376-89664 bp Feature: domain Description: Antirestrict Location: 893 76-89664 bp Feature: gene Location: 90187-90417 bp Feature: gene Location: 90651-92138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91056-91746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91056-91746 bp Feature: gene Location: 92541-92966 bp Feature: domain Description: PRK10276 Location: 92544-92952 bp Feature: domain Description: PRK10276 Location: 92544-92952 bp Feature: gene Location: 92966-94237 bp Feature: domain Description: umuC Location: 92969-94232 bp Feature: domain Description: umuC Location: 92969-9423 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)