myRT

myRT report for GCA_000693315.1_Kleb_pneu_CHS_14_V1

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Seq: KK736814.1 Klebsiella pneumoniae CHS 14 genomic scaffold aeeaZ-supercont1.1, whole genome shotgun sequence (4590709 bp)
Overview 1 RT 1: 329157-332564 bp 2 RT 2: 771799-777404 bp 3 RT 3: 1115255-1120673 bp 4 RT 4: 1320562-1325657 bp 5 RT 5: 2676323-2682806 bp Neighborhood of RT #1 [329157, 332665] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [771799, 777430] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1115255, 1120675] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1320562, 1325659] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2676323, 2682808] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 329157-329888 bp Feature: domain Description: Laminin_G_3 Location: 329478-329832 bp Feature: domain Description: Laminin_G_3 Location: 329478-329832 bp Feature: gene Location: 329885-330094 bp Feature: gene Location: 330544-332031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330949-331639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330949-331 639 bp Feature: gene Location: 332109-332348 bp Feature: gene Location: 332348-332665 bp Feature: domain Description: PRK10276 Location: 332354-332468 bp Feature: domain Description: PRK1 0276 Location: 332354-332468 bp Feature: domain Description: PRK10276 Location: 332495-332564 bp Feature: domain Description: PRK1 0276 Location: 332495-332564 bp Feature: gene Location: 771799-772362 bp Feature: domain Description: YbjK Location: 771805-772342 bp Feature: domain Description: YbjK Location: 771 805-772342 bp Feature: gene Location: 772485-773537 bp Feature: domain Description: int Location: 772488-773487 bp Feature: domain Description: int Location: 772488-773487 bp Feature: gene Location: 773953-775440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774358-775048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774358-775048 bp Feature: gene Location: 775539-776483 bp Feature: gene Location: 776495-777430 bp Feature: domain Description: Phage_CI_repr Location: 776579-776762 bp Feature: domain Description: Phage_CI_repr Location: 776579-776762 bp Feature: domain Description: Phage_CI_repr Location: 776891-777083 bp Feature: domain Description: Phage_CI_repr Location: 776891 -777083 bp Feature: domain Description: Phage_CI_C Location: 777110-777404 bp Feature: domain Description: Phage_CI_C Location: 7771 1 0-777404 bp Feature: gene Location: 1115255-1116394 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115438-1116338 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 1 1 5438-1 1 1 6338 bp Feature: gene Location: 1116565-1116807 bp Feature: domain Description: DinI Location: 1116616-1116796 bp Feature: domain Description: DinI Location: 1 1 1 661 6-1 1 1 6796 bp Feature: gene Location: 1117422-1118909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117827-1118517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 7827-1 1 1 851 7 bp Feature: gene Location: 1118988-1119407 bp Feature: domain Description: PRK10276 Location: 1118991-1119402 bp Feature: domain Description: PRK1 0276 Location: 1 1 1 8991 -1 1 1 9402 bp Feature: gene Location: 1119410-1120675 bp Feature: domain Description: umuC Location: 1119413-1120673 bp Feature: domain Description: umuC Location: 1 1 1 941 3-1 1 20673 bp Feature: gene Location: 1320562-1321011 bp Feature: domain Description: PinE Location: 1320571-1321003 bp Feature: domain Description: PinE Location: 1 320571 -1 321 003 bp Feature: gene Location: 1322406-1323893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1322811-1323501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 32281 1 -1 323501 bp Feature: gene Location: 1323886-1324392 bp Feature: domain Description: PRK10276 Location: 1323976-1324387 bp Feature: domain Description: PRK1 0276 Location: 1 323976-1 324387 bp Feature: gene Location: 1324394-1325659 bp Feature: domain Description: umuC Location: 1324397-1325657 bp Feature: domain Description: umuC Location: 1 324397-1 325657 bp Feature: gene Location: 2676323-2677381 bp Feature: domain Description: YccC Location: 2676329-2677367 bp Feature: domain Description: YccC Location: 2676329-2677367 bp Feature: gene Location: 2677480-2677953 bp Feature: domain Description: PRK10016 Location: 2677483-2677942 bp Feature: domain Description: PRK1 001 6 Location: 2677483-2677942 bp Feature: gene Location: 2678035-2679522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2678440-2679130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2678440-26791 30 bp Feature: gene Location: 2680040-2681203 bp Feature: domain Description: dacD Location: 2680043-2681198 bp Feature: domain Description: dacD Location: 2680043-2681 1 98 bp Feature: gene Location: 2681384-2682808 bp Feature: domain Description: SbcB Location: 2681390-2682806 bp Feature: domain Description: SbcB Location: 2681 390-2682806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736817.1 Klebsiella pneumoniae CHS 14 genomic scaffold aeeaZ-supercont1.4, whole genome shotgun sequence (211462 bp)
Overview 1 RT 1: 115544-120538 bp Neighborhood of RT #1 [115544, 120540] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 115544-116815 bp Feature: domain Description: umuC Location: 115547-116810 bp Feature: domain Description: umuC Location: 115547-116810 bp Feature: gene Location: 116815-117240 bp Feature: domain Description: PRK10276 Location: 116818-117226 bp Feature: domain Description: PRK102 76 Location: 116818-1172 2 6 bp Feature: gene Location: 117643-119130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118048-118738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118048-118738 bp Feature: gene Location: 119364-119594 bp Feature: gene Location: 120115-120540 bp Feature: domain Description: Antirestrict Location: 120250-120538 bp Feature: domain Description: Antirestrict Location: 12 02 50-12 0538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)