myRT

myRT report for GCA_000693335.1_Kleb_pneu_CHS_17_V1

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Seq: KK736824.1 Klebsiella pneumoniae CHS 17 genomic scaffold aeebp-supercont1.1, whole genome shotgun sequence (3043855 bp)
Overview 1 RT 1: 884060-890543 bp Neighborhood of RT #1 [884060, 890545] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884060-885118 bp Feature: domain Description: YccC Location: 884066-885104 bp Feature: domain Description: YccC Location: 884066-8851 04 bp Feature: gene Location: 885217-885690 bp Feature: domain Description: PRK10016 Location: 885220-885679 bp Feature: domain Description: PRK1 001 6 Location: 885220-885679 bp Feature: gene Location: 885772-887259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886177-886867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8861 77-886867 bp Feature: gene Location: 887777-888940 bp Feature: domain Description: dacD Location: 887780-888935 bp Feature: domain Description: dacD Location: 887780-888935 bp Feature: gene Location: 889121-890545 bp Feature: domain Description: SbcB Location: 889127-890543 bp Feature: domain Description: SbcB Location: 8891 27-890543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK736825.1 Klebsiella pneumoniae CHS 17 genomic scaffold aeebp-supercont1.2, whole genome shotgun sequence (1987791 bp)
Overview 1 RT 1: 599855-603262 bp 2 RT 2: 970518-976123 bp 3 RT 3: 1313796-1319214 bp Neighborhood of RT #1 [599855, 603363] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [970518, 976149] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1313796, 1319216] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 599855-600586 bp Feature: domain Description: Laminin_G_3 Location: 600176-600530 bp Feature: domain Description: Laminin_G_3 Location: 600176-600530 bp Feature: gene Location: 600583-600792 bp Feature: gene Location: 601242-602729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 601647-602337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 601647-602 337 bp Feature: gene Location: 602807-603046 bp Feature: gene Location: 603046-603363 bp Feature: domain Description: PRK10276 Location: 603052-603166 bp Feature: domain Description: PRK102 76 Location: 603052 -603166 bp Feature: domain Description: PRK10276 Location: 603193-603262 bp Feature: domain Description: PRK102 76 Location: 603193-6032 62 bp Feature: gene Location: 970518-971081 bp Feature: domain Description: YbjK Location: 970524-971061 bp Feature: domain Description: YbjK Location: 97052 4-971061 bp Feature: gene Location: 971204-972256 bp Feature: domain Description: int Location: 971207-972206 bp Feature: domain Description: int Location: 9712 07-972 2 06 bp Feature: gene Location: 972672-974159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 973077-973767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 973077-973767 bp Feature: gene Location: 974258-975202 bp Feature: gene Location: 975214-976149 bp Feature: domain Description: Phage_CI_repr Location: 975298-975481 bp Feature: domain Description: Phage_CI_repr Location: 9752 98-975481 bp Feature: domain Description: Phage_CI_repr Location: 975610-975802 bp Feature: domain Description: Phage_CI_repr Location: 975610-975802 bp Feature: domain Description: Phage_CI_C Location: 975829-976123 bp Feature: domain Description: Phage_CI_C Location: 97582 9-97612 3 bp Feature: gene Location: 1313796-1314935 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1313979-1314879 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1313979-1314879 bp Feature: gene Location: 1315106-1315348 bp Feature: domain Description: DinI Location: 1315157-1315337 bp Feature: domain Description: DinI Location: 1315157-1315337 bp Feature: gene Location: 1315963-1317450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1316368-1317058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1316368-1317058 bp Feature: gene Location: 1317529-1317948 bp Feature: domain Description: PRK10276 Location: 1317532-1317943 bp Feature: domain Description: PRK102 76 Location: 1317532 -1317943 bp Feature: gene Location: 1317951-1319216 bp Feature: domain Description: umuC Location: 1317954-1319214 bp Feature: domain Description: umuC Location: 1317954-13192 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)