myRT

myRT report for GCA_000693355.1_Kleb_pneu_CHS_18_V1

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Seq: KK736833.1 Klebsiella pneumoniae CHS 18 genomic scaffold aeeaC-supercont1.1, whole genome shotgun sequence (2013129 bp)
Overview 1 RT 1: 583662-587069 bp 2 RT 2: 1026496-1032101 bp 3 RT 3: 1369592-1375010 bp 4 RT 4: 1556765-1561860 bp Neighborhood of RT #1 [583662, 587170] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026496, 1032127] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369592, 1375012] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1556765, 1561862] PinE RVT-GII PRK10276 umuC Feature: gene Location: 583662-584393 bp Feature: domain Description: Laminin_G_3 Location: 583983-584337 bp Feature: domain Description: Laminin_G_3 Location: 583983-584337 bp Feature: gene Location: 584390-584599 bp Feature: gene Location: 585052-586536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585454-586144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585454-5861 44 bp Feature: gene Location: 586614-586853 bp Feature: gene Location: 586853-587170 bp Feature: domain Description: PRK10276 Location: 586859-586973 bp Feature: domain Description: PRK1 0276 Location: 586859-586973 bp Feature: domain Description: PRK10276 Location: 587000-587069 bp Feature: domain Description: PRK1 0276 Location: 587000-587069 bp Feature: gene Location: 1026496-1027059 bp Feature: domain Description: YbjK Location: 1026502-1027039 bp Feature: domain Description: YbjK Location: 1 026502-1 027039 bp Feature: gene Location: 1027182-1028234 bp Feature: domain Description: int Location: 1027185-1028184 bp Feature: domain Description: int Location: 1 0271 85-1 0281 84 bp Feature: gene Location: 1028653-1030137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029055-1029745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029055-1 029745 bp Feature: gene Location: 1030236-1031180 bp Feature: gene Location: 1031192-1032127 bp Feature: domain Description: Phage_CI_repr Location: 1031276-1031459 bp Feature: domain Description: Phage_CI_repr Location: 1 031 276-1 031 459 bp Feature: domain Description: Phage_CI_repr Location: 1031588-1031780 bp Feature: domain Description: Phage_CI_repr Location: 1 031 588-1 031 780 bp Feature: domain Description: Phage_CI_C Location: 1031807-1032101 bp Feature: domain Description: Phage_CI_C Location: 1 031 807-1 0321 01 bp Feature: gene Location: 1369592-1370731 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369775-1370675 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 369775-1 370675 bp Feature: gene Location: 1370902-1371144 bp Feature: domain Description: DinI Location: 1370953-1371133 bp Feature: domain Description: DinI Location: 1 370953-1 371 1 33 bp Feature: gene Location: 1371762-1373246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372164-1372854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3721 64-1 372854 bp Feature: gene Location: 1373325-1373744 bp Feature: domain Description: PRK10276 Location: 1373328-1373739 bp Feature: domain Description: PRK1 0276 Location: 1 373328-1 373739 bp Feature: gene Location: 1373747-1375012 bp Feature: domain Description: umuC Location: 1373750-1375010 bp Feature: domain Description: umuC Location: 1 373750-1 37501 0 bp Feature: gene Location: 1556765-1557214 bp Feature: domain Description: PinE Location: 1556774-1557206 bp Feature: domain Description: PinE Location: 1 556774-1 557206 bp Feature: gene Location: 1558612-1560096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1559014-1559704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 55901 4-1 559704 bp Feature: gene Location: 1560089-1560595 bp Feature: domain Description: PRK10276 Location: 1560179-1560590 bp Feature: domain Description: PRK1 0276 Location: 1 5601 79-1 560590 bp Feature: gene Location: 1560597-1561862 bp Feature: domain Description: umuC Location: 1560600-1561860 bp Feature: domain Description: umuC Location: 1 560600-1 561 860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)

Seq: KK736834.1 Klebsiella pneumoniae CHS 18 genomic scaffold aeeaC-supercont1.2, whole genome shotgun sequence (1437046 bp)
Overview 1 RT 1: 884362-890845 bp Neighborhood of RT #1 [884362, 890847] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884362-885420 bp Feature: domain Description: YccC Location: 884368-885406 bp Feature: domain Description: YccC Location: 884368-885406 bp Feature: gene Location: 885519-885992 bp Feature: domain Description: PRK10016 Location: 885522-885981 bp Feature: domain Description: PRK10016 Location: 88552 2 -885981 bp Feature: gene Location: 886074-887558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886476-887166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886476-887166 bp Feature: gene Location: 888079-889242 bp Feature: domain Description: dacD Location: 888082-889237 bp Feature: domain Description: dacD Location: 888082 -8892 37 bp Feature: gene Location: 889423-890847 bp Feature: domain Description: SbcB Location: 889429-890845 bp Feature: domain Description: SbcB Location: 88942 9-890845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)