myRT

myRT report for GCA_000693375.1_Kleb_pneu_CHS_19_V1

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Seq: KK736844.1 Klebsiella pneumoniae CHS 19 genomic scaffold aedZU-supercont1.1, whole genome shotgun sequence (2809273 bp)
Overview 1 RT 1: 899736-906219 bp Neighborhood of RT #1 [899736, 906221] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 899736-900794 bp Feature: domain Description: YccC Location: 899742-900780 bp Feature: domain Description: YccC Location: 899742-900780 bp Feature: gene Location: 900893-901366 bp Feature: domain Description: PRK10016 Location: 900896-901355 bp Feature: domain Description: PRK1 001 6 Location: 900896-901 355 bp Feature: gene Location: 901448-902935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901853-902543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901 853-902543 bp Feature: gene Location: 903453-904616 bp Feature: domain Description: dacD Location: 903456-904611 bp Feature: domain Description: dacD Location: 903456-90461 1 bp Feature: gene Location: 904797-906221 bp Feature: domain Description: SbcB Location: 904803-906219 bp Feature: domain Description: SbcB Location: 904803-90621 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK736850.1 Klebsiella pneumoniae CHS 19 genomic scaffold aedZU-supercont1.7, whole genome shotgun sequence (76046 bp)
Overview 1 RT 1: 68644-73635 bp Neighborhood of RT #1 [68644, 73640] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 68644-69069 bp Feature: domain Description: Antirestrict Location: 68779-69067 bp Feature: domain Description: Antirestrict Location: 68779-69067 bp Feature: gene Location: 69590-69820 bp Feature: gene Location: 70054-71541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70459-71149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70459-71149 bp Feature: gene Location: 71944-72369 bp Feature: domain Description: PRK10276 Location: 71947-72355 bp Feature: domain Description: PRK102 76 Location: 71947-72 355 bp Feature: gene Location: 72369-73640 bp Feature: domain Description: umuC Location: 72372-73635 bp Feature: domain Description: umuC Location: 72 372 -73635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK736845.1 Klebsiella pneumoniae CHS 19 genomic scaffold aedZU-supercont1.2, whole genome shotgun sequence (2035489 bp)
Overview 1 RT 1: 585792-589199 bp 2 RT 2: 1028434-1034039 bp 3 RT 3: 1371674-1377092 bp 4 RT 4: 1549290-1555155 bp Neighborhood of RT #1 [585792, 589300] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1028434, 1034065] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1371674, 1377094] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1549290, 1555157] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 585792-586523 bp Feature: domain Description: Laminin_G_3 Location: 586113-586467 bp Feature: domain Description: Laminin_G_3 Location: 586113 -586467 bp Feature: gene Location: 586520-586729 bp Feature: gene Location: 587179-588666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587584-588274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587584-588274 bp Feature: gene Location: 588744-588983 bp Feature: gene Location: 588983-589300 bp Feature: domain Description: PRK10276 Location: 588989-589103 bp Feature: domain Description: PRK10276 Location: 588989-589103 bp Feature: domain Description: PRK10276 Location: 589130-589199 bp Feature: domain Description: PRK10276 Location: 58913 0-589199 bp Feature: gene Location: 1028434-1028997 bp Feature: domain Description: YbjK Location: 1028440-1028977 bp Feature: domain Description: YbjK Location: 1028440-1028977 bp Feature: gene Location: 1029120-1030172 bp Feature: domain Description: int Location: 1029123-1030122 bp Feature: domain Description: int Location: 1029123 -103 0122 bp Feature: gene Location: 1030588-1032075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030993-1031683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 0993 -103 1683 bp Feature: gene Location: 1032174-1033118 bp Feature: gene Location: 1033130-1034065 bp Feature: domain Description: Phage_CI_repr Location: 1033214-1033397 bp Feature: domain Description: Phage_CI_repr Location: 103 3 214-103 3 3 97 bp Feature: domain Description: Phage_CI_repr Location: 1033526-1033718 bp Feature: domain Description: Phage_CI_repr Location: 103 3 526-103 3 718 bp Feature: domain Description: Phage_CI_C Location: 1033745-1034039 bp Feature: domain Description: Phage_CI_C Location: 103 3 745-103 403 9 bp Feature: gene Location: 1371674-1372813 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1371857-1372757 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 71857-13 72757 bp Feature: gene Location: 1372984-1373226 bp Feature: domain Description: DinI Location: 1373035-1373215 bp Feature: domain Description: DinI Location: 13 73 03 5-13 73 215 bp Feature: gene Location: 1373841-1375328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374246-1374936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 74246-13 7493 6 bp Feature: gene Location: 1375407-1375826 bp Feature: domain Description: PRK10276 Location: 1375410-1375821 bp Feature: domain Description: PRK10276 Location: 13 75410-13 75821 bp Feature: gene Location: 1375829-1377094 bp Feature: domain Description: umuC Location: 1375832-1377092 bp Feature: domain Description: umuC Location: 13 7583 2-13 77092 bp Feature: gene Location: 1549290-1549994 bp Feature: domain Description: Rve Location: 1549293-1549938 bp Feature: domain Description: Rve Location: 1549293 -154993 8 bp Feature: gene Location: 1550060-1550509 bp Feature: domain Description: PinE Location: 1550069-1550501 bp Feature: domain Description: PinE Location: 1550069-1550501 bp Feature: gene Location: 1551904-1553391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1552309-1552999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15523 09-1552999 bp Feature: gene Location: 1553384-1553890 bp Feature: domain Description: PRK10276 Location: 1553474-1553885 bp Feature: domain Description: PRK10276 Location: 1553 474-1553 885 bp Feature: gene Location: 1553892-1555157 bp Feature: domain Description: umuC Location: 1553895-1555155 bp Feature: domain Description: umuC Location: 1553 895-1555155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)