myRT

myRT report for GCA_000693395.1_Kleb_pneu_CHS_20_V1

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Seq: KK736857.1 Klebsiella pneumoniae CHS 20 genomic scaffold aeebf-supercont1.1, whole genome shotgun sequence (2973052 bp)
Overview 1 RT 1: 927749-933167 bp 2 RT 2: 1117466-1122997 bp 3 RT 3: 1202483-1206185 bp Neighborhood of RT #1 [927749, 933169] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [1117466, 1122999] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #3 [1202483, 1206190] Laminin_G_3 RVT-GII PRK10597 Feature: gene Location: 927749-928888 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 927932-928832 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 927932-928832 bp Feature: gene Location: 929059-929301 bp Feature: domain Description: DinI Location: 929110-929290 bp Feature: domain Description: DinI Location: 9291 1 0-929290 bp Feature: gene Location: 929919-931403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930321-931011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930321 -931 01 1 bp Feature: gene Location: 931482-931901 bp Feature: domain Description: PRK10276 Location: 931485-931896 bp Feature: domain Description: PRK1 0276 Location: 931 485-931 896 bp Feature: gene Location: 931904-933169 bp Feature: domain Description: umuC Location: 931907-933167 bp Feature: domain Description: umuC Location: 931 907-9331 67 bp Feature: gene Location: 1117466-1117617 bp Feature: domain Description: Rve Location: 1117487-1117616 bp Feature: domain Description: Rve Location: 1 1 1 7487-1 1 1 761 6 bp Feature: gene Location: 1117902-1118351 bp Feature: domain Description: PinE Location: 1117911-1118343 bp Feature: domain Description: PinE Location: 1 1 1 791 1 -1 1 1 8343 bp Feature: gene Location: 1119749-1121233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1120151-1120841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 201 51 -1 1 20841 bp Feature: gene Location: 1121226-1121732 bp Feature: domain Description: PRK10276 Location: 1121316-1121727 bp Feature: domain Description: PRK1 0276 Location: 1 1 21 31 6-1 1 21 727 bp Feature: gene Location: 1121734-1122999 bp Feature: domain Description: umuC Location: 1121737-1122997 bp Feature: domain Description: umuC Location: 1 1 21 737-1 1 22997 bp Feature: gene Location: 1202483-1203214 bp Feature: domain Description: Laminin_G_3 Location: 1202819-1203158 bp Feature: domain Description: Laminin_G_3 Location: 1 20281 9-1 2031 58 bp Feature: gene Location: 1203211-1203420 bp Feature: gene Location: 1203873-1205357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1204275-1204965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 204275-1 204965 bp Feature: gene Location: 1205435-1205719 bp Feature: gene Location: 1205942-1206190 bp Feature: domain Description: PRK10597 Location: 1205945-1206185 bp Feature: domain Description: PRK1 0597 Location: 1 205945-1 2061 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), PinE (COG1961), Laminin_G_3 (pfam13385), PRK10597 (DNA damage-inducible protein I; Provisional)