myRT

myRT report for GCA_000693435.1_Kleb_pneu_CHS_23_V1

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Seq: KK736892.1 Klebsiella pneumoniae CHS 23 genomic scaffold aeebb-supercont1.6, whole genome shotgun sequence (89184 bp)
Overview 1 RT 1: 85698-88892 bp Neighborhood of RT #1 [85698, 89184] umuC PRK10276 RVT-GII Feature: gene Location: 85698-86969 bp Feature: domain Description: umuC Location: 85701-86964 bp Feature: domain Description: umuC Location: 85701 -86964 bp Feature: gene Location: 86969-87394 bp Feature: domain Description: PRK10276 Location: 86972-87380 bp Feature: domain Description: PRK1 0276 Location: 86972-87380 bp Feature: gene Location: 87797-89184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88202-88892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88202-88892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK736887.1 Klebsiella pneumoniae CHS 23 genomic scaffold aeebb-supercont1.1, whole genome shotgun sequence (2030553 bp)
Overview 1 RT 1: 582900-586307 bp 2 RT 2: 1025542-1031147 bp 3 RT 3: 1369036-1374454 bp 4 RT 4: 1547953-1553776 bp Neighborhood of RT #1 [582900, 586408] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025542, 1031173] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369036, 1374456] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1547953, 1553778] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 582900-583631 bp Feature: domain Description: Laminin_G_3 Location: 583221-583575 bp Feature: domain Description: Laminin_G_3 Location: 5832 2 1-583575 bp Feature: gene Location: 583628-583837 bp Feature: gene Location: 584287-585774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584692-585382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584692 -585382 bp Feature: gene Location: 585852-586091 bp Feature: gene Location: 586091-586408 bp Feature: domain Description: PRK10276 Location: 586097-586211 bp Feature: domain Description: PRK102 76 Location: 586097-5862 11 bp Feature: domain Description: PRK10276 Location: 586238-586307 bp Feature: domain Description: PRK102 76 Location: 5862 38-586307 bp Feature: gene Location: 1025542-1026105 bp Feature: domain Description: YbjK Location: 1025548-1026085 bp Feature: domain Description: YbjK Location: 102 5548-102 6085 bp Feature: gene Location: 1026228-1027280 bp Feature: domain Description: int Location: 1026231-1027230 bp Feature: domain Description: int Location: 102 62 31-102 72 30 bp Feature: gene Location: 1027696-1029183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028101-1028791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8101-102 8791 bp Feature: gene Location: 1029282-1030226 bp Feature: gene Location: 1030238-1031173 bp Feature: domain Description: Phage_CI_repr Location: 1030322-1030505 bp Feature: domain Description: Phage_CI_repr Location: 103032 2 -1030505 bp Feature: domain Description: Phage_CI_repr Location: 1030634-1030826 bp Feature: domain Description: Phage_CI_repr Location: 1030634-103082 6 bp Feature: domain Description: Phage_CI_C Location: 1030853-1031147 bp Feature: domain Description: Phage_CI_C Location: 1030853-1031147 bp Feature: gene Location: 1369036-1370175 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369219-1370119 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13692 19-1370119 bp Feature: gene Location: 1370346-1370588 bp Feature: domain Description: DinI Location: 1370397-1370577 bp Feature: domain Description: DinI Location: 1370397-1370577 bp Feature: gene Location: 1371203-1372690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371608-1372298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371608-1372 2 98 bp Feature: gene Location: 1372769-1373188 bp Feature: domain Description: PRK10276 Location: 1372772-1373183 bp Feature: domain Description: PRK102 76 Location: 1372 772 -1373183 bp Feature: gene Location: 1373191-1374456 bp Feature: domain Description: umuC Location: 1373194-1374454 bp Feature: domain Description: umuC Location: 1373194-1374454 bp Feature: gene Location: 1547953-1548615 bp Feature: domain Description: Rve Location: 1547959-1548559 bp Feature: domain Description: Rve Location: 1547959-1548559 bp Feature: gene Location: 1548681-1549130 bp Feature: domain Description: PinE Location: 1548690-1549122 bp Feature: domain Description: PinE Location: 1548690-154912 2 bp Feature: gene Location: 1550525-1552012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1550930-1551620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1550930-155162 0 bp Feature: gene Location: 1552005-1552511 bp Feature: domain Description: PRK10276 Location: 1552095-1552506 bp Feature: domain Description: PRK102 76 Location: 1552 095-1552 506 bp Feature: gene Location: 1552513-1553778 bp Feature: domain Description: umuC Location: 1552516-1553776 bp Feature: domain Description: umuC Location: 1552 516-1553776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KK736889.1 Klebsiella pneumoniae CHS 23 genomic scaffold aeebb-supercont1.3, whole genome shotgun sequence (1457131 bp)
Overview 1 RT 1: 904447-910930 bp Neighborhood of RT #1 [904447, 910932] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 904447-905505 bp Feature: domain Description: YccC Location: 904453-905491 bp Feature: domain Description: YccC Location: 904453 -905491 bp Feature: gene Location: 905604-906077 bp Feature: domain Description: PRK10016 Location: 905607-906066 bp Feature: domain Description: PRK10016 Location: 905607-906066 bp Feature: gene Location: 906159-907646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 906564-907254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 906564-907254 bp Feature: gene Location: 908164-909327 bp Feature: domain Description: dacD Location: 908167-909322 bp Feature: domain Description: dacD Location: 908167-9093 22 bp Feature: gene Location: 909508-910932 bp Feature: domain Description: SbcB Location: 909514-910930 bp Feature: domain Description: SbcB Location: 909514-91093 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)