myRT

myRT report for GCA_000693495.1_Kleb_pneu_CHS_26_V1

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Seq: KK736925.1 Klebsiella pneumoniae CHS 26 genomic scaffold aedZG-supercont1.4, whole genome shotgun sequence (77438 bp)
Overview 1 RT 1: 73952-77146 bp Neighborhood of RT #1 [73952, 77438] umuC PRK10276 RVT-GII Feature: gene Location: 73952-75223 bp Feature: domain Description: umuC Location: 73955-75218 bp Feature: domain Description: umuC Location: 73955-7521 8 bp Feature: gene Location: 75223-75648 bp Feature: domain Description: PRK10276 Location: 75226-75634 bp Feature: domain Description: PRK1 0276 Location: 75226-75634 bp Feature: gene Location: 76051-77438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76456-77146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76456-771 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK736923.1 Klebsiella pneumoniae CHS 26 genomic scaffold aedZG-supercont1.2, whole genome shotgun sequence (1563269 bp)
Overview 1 RT 1: 586033-589440 bp 2 RT 2: 1028673-1034278 bp 3 RT 3: 1372057-1377475 bp Neighborhood of RT #1 [586033, 589541] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1028673, 1034304] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1372057, 1377477] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 586033-586764 bp Feature: domain Description: Laminin_G_3 Location: 586354-586708 bp Feature: domain Description: Laminin_G_3 Location: 586354-586708 bp Feature: gene Location: 586761-586970 bp Feature: gene Location: 587420-588907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587825-588515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58782 5-588515 bp Feature: gene Location: 588985-589224 bp Feature: gene Location: 589224-589541 bp Feature: domain Description: PRK10276 Location: 589230-589344 bp Feature: domain Description: PRK102 76 Location: 5892 30-589344 bp Feature: domain Description: PRK10276 Location: 589371-589440 bp Feature: domain Description: PRK102 76 Location: 589371-589440 bp Feature: gene Location: 1028673-1029236 bp Feature: domain Description: YbjK Location: 1028679-1029216 bp Feature: domain Description: YbjK Location: 102 8679-102 92 16 bp Feature: gene Location: 1029359-1030411 bp Feature: domain Description: int Location: 1029362-1030361 bp Feature: domain Description: int Location: 102 9362 -1030361 bp Feature: gene Location: 1030827-1032314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031232-1031922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10312 32 -103192 2 bp Feature: gene Location: 1032413-1033357 bp Feature: gene Location: 1033369-1034304 bp Feature: domain Description: Phage_CI_repr Location: 1033453-1033636 bp Feature: domain Description: Phage_CI_repr Location: 1033453-1033636 bp Feature: domain Description: Phage_CI_repr Location: 1033765-1033957 bp Feature: domain Description: Phage_CI_repr Location: 1033765-1033957 bp Feature: domain Description: Phage_CI_C Location: 1033984-1034278 bp Feature: domain Description: Phage_CI_C Location: 1033984-10342 78 bp Feature: gene Location: 1372057-1373196 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372240-1373140 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372 2 40-1373140 bp Feature: gene Location: 1373367-1373609 bp Feature: domain Description: DinI Location: 1373418-1373598 bp Feature: domain Description: DinI Location: 1373418-1373598 bp Feature: gene Location: 1374224-1375711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374629-1375319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137462 9-1375319 bp Feature: gene Location: 1375790-1376209 bp Feature: domain Description: PRK10276 Location: 1375793-1376204 bp Feature: domain Description: PRK102 76 Location: 1375793-13762 04 bp Feature: gene Location: 1376212-1377477 bp Feature: domain Description: umuC Location: 1376215-1377475 bp Feature: domain Description: umuC Location: 13762 15-1377475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK736928.1 Klebsiella pneumoniae CHS 26 genomic scaffold aedZG-supercont1.7, whole genome shotgun sequence (33239 bp)
Overview 1 RT 1: 15996-21478 bp Neighborhood of RT #1 [15996, 21486] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 15996-16667 bp Feature: domain Description: Plasmid_stab_B Location: 16011-16218 bp Feature: domain Description: Plasmid_stab_B Location: 16011-16218 bp Feature: domain Description: Plasmid_stab_B Location: 16323-16530 bp Feature: domain Description: Plasmid_stab_B Location: 163 23 -1653 0 bp Feature: gene Location: 16670-17641 bp Feature: domain Description: StbA Location: 16673-17618 bp Feature: domain Description: StbA Location: 16673 -17618 bp Feature: gene Location: 18214-19701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18619-19309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18619-193 09 bp Feature: gene Location: 19784-20215 bp Feature: domain Description: PRK10276 Location: 19835-20198 bp Feature: domain Description: PRK10276 Location: 1983 5-20198 bp Feature: gene Location: 20215-21486 bp Feature: domain Description: umuC Location: 20218-21478 bp Feature: domain Description: umuC Location: 20218-21478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK736922.1 Klebsiella pneumoniae CHS 26 genomic scaffold aedZG-supercont1.1, whole genome shotgun sequence (3890958 bp)
Overview 1 RT 1: 56-5921 bp 2 RT 2: 1248976-1255459 bp Neighborhood of RT #1 [56, 5923] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1248976, 1255461] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 56-760 bp Feature: domain Description: Rve Location: 59-704 bp Feature: domain Description: Rve Location: 59-704 bp Feature: gene Location: 826-1275 bp Feature: domain Description: PinE Location: 835-1267 bp Feature: domain Description: PinE Location: 835-1267 bp Feature: gene Location: 2670-4157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3075-3765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3075-3765 bp Feature: gene Location: 4150-4656 bp Feature: domain Description: PRK10276 Location: 4240-4651 bp Feature: domain Description: PRK10276 Location: 4 24 0-4 651 bp Feature: gene Location: 4658-5923 bp Feature: domain Description: umuC Location: 4661-5921 bp Feature: domain Description: umuC Location: 4 661-5921 bp Feature: gene Location: 1248976-1250034 bp Feature: domain Description: YccC Location: 1248982-1250020 bp Feature: domain Description: YccC Location: 124 8982-1250020 bp Feature: gene Location: 1250133-1250606 bp Feature: domain Description: PRK10016 Location: 1250136-1250595 bp Feature: domain Description: PRK10016 Location: 1250136-1250595 bp Feature: gene Location: 1250688-1252175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1251093-1251783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1251093-1251783 bp Feature: gene Location: 1252693-1253856 bp Feature: domain Description: dacD Location: 1252696-1253851 bp Feature: domain Description: dacD Location: 1252696-1253851 bp Feature: gene Location: 1254037-1255461 bp Feature: domain Description: SbcB Location: 1254043-1255459 bp Feature: domain Description: SbcB Location: 1254 04 3-12554 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)