myRT

myRT report for GCA_000693515.1_Kleb_pneu_CHS_27_V1

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Seq: KK736938.1 Klebsiella pneumoniae CHS 27 genomic scaffold aedZT-supercont1.2, whole genome shotgun sequence (1567692 bp)
Overview 1 RT 1: 584484-587891 bp 2 RT 2: 1027124-1032729 bp 3 RT 3: 1370402-1376047 bp Neighborhood of RT #1 [584484, 587992] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1027124, 1032755] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370402, 1376049] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 584484-585215 bp Feature: domain Description: Laminin_G_3 Location: 584805-585159 bp Feature: domain Description: Laminin_G_3 Location: 584805-5851 59 bp Feature: gene Location: 585212-585421 bp Feature: gene Location: 585871-587358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586276-586966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586276-586966 bp Feature: gene Location: 587436-587675 bp Feature: gene Location: 587675-587992 bp Feature: domain Description: PRK10276 Location: 587681-587795 bp Feature: domain Description: PRK1 0276 Location: 587681 -587795 bp Feature: domain Description: PRK10276 Location: 587822-587891 bp Feature: domain Description: PRK1 0276 Location: 587822-587891 bp Feature: gene Location: 1027124-1027687 bp Feature: domain Description: YbjK Location: 1027130-1027667 bp Feature: domain Description: YbjK Location: 1 0271 30-1 027667 bp Feature: gene Location: 1027810-1028862 bp Feature: domain Description: int Location: 1027813-1028812 bp Feature: domain Description: int Location: 1 02781 3-1 02881 2 bp Feature: gene Location: 1029278-1030765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029683-1030373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029683-1 030373 bp Feature: gene Location: 1030864-1031808 bp Feature: gene Location: 1031820-1032755 bp Feature: domain Description: Phage_CI_repr Location: 1031904-1032087 bp Feature: domain Description: Phage_CI_repr Location: 1 031 904-1 032087 bp Feature: domain Description: Phage_CI_repr Location: 1032216-1032408 bp Feature: domain Description: Phage_CI_repr Location: 1 03221 6-1 032408 bp Feature: domain Description: Phage_CI_C Location: 1032435-1032729 bp Feature: domain Description: Phage_CI_C Location: 1 032435-1 032729 bp Feature: gene Location: 1370402-1371541 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370585-1371485 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 370585-1 371 485 bp Feature: gene Location: 1371712-1371954 bp Feature: domain Description: DinI Location: 1371763-1371943 bp Feature: domain Description: DinI Location: 1 371 763-1 371 943 bp Feature: gene Location: 1372796-1374283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373201-1373891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 373201 -1 373891 bp Feature: gene Location: 1374362-1374781 bp Feature: domain Description: PRK10276 Location: 1374365-1374776 bp Feature: domain Description: PRK1 0276 Location: 1 374365-1 374776 bp Feature: gene Location: 1374784-1376049 bp Feature: domain Description: umuC Location: 1374787-1376047 bp Feature: domain Description: umuC Location: 1 374787-1 376047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK736937.1 Klebsiella pneumoniae CHS 27 genomic scaffold aedZT-supercont1.1, whole genome shotgun sequence (3902065 bp)
Overview 1 RT 1: 1246928-1253411 bp Neighborhood of RT #1 [1246928, 1253413] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1246928-1247986 bp Feature: domain Description: YccC Location: 1246934-1247972 bp Feature: domain Description: YccC Location: 12 46934-12 47972 bp Feature: gene Location: 1248085-1248558 bp Feature: domain Description: PRK10016 Location: 1248088-1248547 bp Feature: domain Description: PRK10016 Location: 12 48088-12 48547 bp Feature: gene Location: 1248640-1250127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1249045-1249735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 49045-12 49735 bp Feature: gene Location: 1250645-1251808 bp Feature: domain Description: dacD Location: 1250648-1251803 bp Feature: domain Description: dacD Location: 12 50648-12 51803 bp Feature: gene Location: 1251989-1253413 bp Feature: domain Description: SbcB Location: 1251995-1253411 bp Feature: domain Description: SbcB Location: 12 51995-12 53411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK736940.1 Klebsiella pneumoniae CHS 27 genomic scaffold aedZT-supercont1.4, whole genome shotgun sequence (101550 bp)
Overview 1 RT 1: 97010-101550 bp Neighborhood of RT #1 [97010, 101550] Antirestrict RVT-GII StbA Plasmid_stab_B Feature: gene Location: 97010-97435 bp Feature: domain Description: Antirestrict Location: 97145-97433 bp Feature: domain Description: Antirestrict Location: 97145-9743 3 bp Feature: gene Location: 97956-98186 bp Feature: gene Location: 98420-99907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98825-99515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98825-99515 bp Feature: gene Location: 100480-101451 bp Feature: domain Description: StbA Location: 100483-101428 bp Feature: domain Description: StbA Location: 100483 -101428 bp Feature: gene Location: 101454-101550 bp Feature: domain Description: Plasmid_stab_B Location: 101469-101550 bp Feature: domain Description: Plasmid_stab_B Location: 101469-101550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), Plasmid_stab_B (pfam10784), Antirestrict (pfam03230), RVT-GII