myRT

myRT report for GCA_000693535.1_Kleb_pneu_CHS_28_V1

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Seq: KK736954.1 Klebsiella pneumoniae CHS 28 genomic scaffold aeeWi-supercont1.2, whole genome shotgun sequence (1796451 bp)
Overview 1 RT 1: 341439-344846 bp 2 RT 2: 784079-789684 bp Neighborhood of RT #1 [341439, 344947] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [784079, 789710] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Feature: gene Location: 341439-342170 bp Feature: domain Description: Laminin_G_3 Location: 341760-342114 bp Feature: domain Description: Laminin_G_3 Location: 341 760-3421 1 4 bp Feature: gene Location: 342167-342376 bp Feature: gene Location: 342826-344313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343231-343921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343231 -343921 bp Feature: gene Location: 344391-344630 bp Feature: gene Location: 344630-344947 bp Feature: domain Description: PRK10276 Location: 344636-344750 bp Feature: domain Description: PRK1 0276 Location: 344636-344750 bp Feature: domain Description: PRK10276 Location: 344777-344846 bp Feature: domain Description: PRK1 0276 Location: 344777-344846 bp Feature: gene Location: 784079-784642 bp Feature: domain Description: YbjK Location: 784085-784622 bp Feature: domain Description: YbjK Location: 784085-784622 bp Feature: gene Location: 784765-785817 bp Feature: domain Description: int Location: 784768-785767 bp Feature: domain Description: int Location: 784768-785767 bp Feature: gene Location: 786233-787720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786638-787328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786638-787328 bp Feature: gene Location: 787819-788763 bp Feature: gene Location: 788775-789710 bp Feature: domain Description: Phage_CI_repr Location: 788859-789042 bp Feature: domain Description: Phage_CI_repr Location: 788859-789042 bp Feature: domain Description: Phage_CI_repr Location: 789171-789363 bp Feature: domain Description: Phage_CI_repr Location: 7891 71 -789363 bp Feature: domain Description: Phage_CI_C Location: 789390-789684 bp Feature: domain Description: Phage_CI_C Location: 789390-789684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452)

Seq: KK736964.1 Klebsiella pneumoniae CHS 28 genomic scaffold aeeWi-supercont1.12, whole genome shotgun sequence (22727 bp)
Overview 1 RT 1: 14991-19982 bp Neighborhood of RT #1 [14991, 19987] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 14991-15416 bp Feature: domain Description: Antirestrict Location: 15126-15414 bp Feature: domain Description: Antirestrict Location: 1512 6-15414 bp Feature: gene Location: 15937-16167 bp Feature: gene Location: 16401-17888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16806-17496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16806-17496 bp Feature: gene Location: 18291-18716 bp Feature: domain Description: PRK10276 Location: 18294-18702 bp Feature: domain Description: PRK102 76 Location: 182 94-18702 bp Feature: gene Location: 18716-19987 bp Feature: domain Description: umuC Location: 18719-19982 bp Feature: domain Description: umuC Location: 18719-19982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK736953.1 Klebsiella pneumoniae CHS 28 genomic scaffold aeeWi-supercont1.1, whole genome shotgun sequence (2288454 bp)
Overview 1 RT 1: 884773-891256 bp Neighborhood of RT #1 [884773, 891258] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884773-885831 bp Feature: domain Description: YccC Location: 884779-885817 bp Feature: domain Description: YccC Location: 884779-885817 bp Feature: gene Location: 885930-886403 bp Feature: domain Description: PRK10016 Location: 885933-886392 bp Feature: domain Description: PRK10016 Location: 88593 3 -8863 92 bp Feature: gene Location: 886485-887972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886890-887580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886890-887580 bp Feature: gene Location: 888490-889653 bp Feature: domain Description: dacD Location: 888493-889648 bp Feature: domain Description: dacD Location: 888493 -889648 bp Feature: gene Location: 889834-891258 bp Feature: domain Description: SbcB Location: 889840-891256 bp Feature: domain Description: SbcB Location: 889840-891256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)