myRT

myRT report for GCA_000693555.1_Kleb_pneu_CHS_29_V1

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Seq: KK736969.1 Klebsiella pneumoniae CHS 29 genomic scaffold aeeaU-supercont1.2, whole genome shotgun sequence (1309731 bp)
Overview 1 RT 1: 756977-763460 bp Neighborhood of RT #1 [756977, 763462] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 756977-758035 bp Feature: domain Description: YccC Location: 756983-758021 bp Feature: domain Description: YccC Location: 756983-758021 bp Feature: gene Location: 758134-758607 bp Feature: domain Description: PRK10016 Location: 758137-758596 bp Feature: domain Description: PRK1 001 6 Location: 7581 37-758596 bp Feature: gene Location: 758689-760176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759094-759784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759094-759784 bp Feature: gene Location: 760694-761857 bp Feature: domain Description: dacD Location: 760697-761852 bp Feature: domain Description: dacD Location: 760697-761 852 bp Feature: gene Location: 762038-763462 bp Feature: domain Description: SbcB Location: 762044-763460 bp Feature: domain Description: SbcB Location: 762044-763460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK736972.1 Klebsiella pneumoniae CHS 29 genomic scaffold aeeaU-supercont1.5, whole genome shotgun sequence (495462 bp)
Overview 1 RT 1: 10636-16303 bp Neighborhood of RT #1 [10636, 16305] DDE_Tnp_IS240 PinE RVT-GII PRK10276 umuC Feature: gene Location: 10636-11142 bp Feature: domain Description: DDE_Tnp_IS240 Location: 10663-11074 bp Feature: domain Description: DDE_Tnp_IS2 40 Location: 10663-11074 bp Feature: gene Location: 11208-11657 bp Feature: domain Description: PinE Location: 11217-11649 bp Feature: domain Description: PinE Location: 112 17-11649 bp Feature: gene Location: 13052-14539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13457-14147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13457-14147 bp Feature: gene Location: 14532-15038 bp Feature: domain Description: PRK10276 Location: 14622-15033 bp Feature: domain Description: PRK102 76 Location: 1462 2 -15033 bp Feature: gene Location: 15040-16305 bp Feature: domain Description: umuC Location: 15043-16303 bp Feature: domain Description: umuC Location: 15043-16303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS240 (pfam13610), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK736968.1 Klebsiella pneumoniae CHS 29 genomic scaffold aeeaU-supercont1.1, whole genome shotgun sequence (1665524 bp)
Overview 1 RT 1: 583256-586663 bp 2 RT 2: 1025898-1031503 bp 3 RT 3: 1327058-1332476 bp 4 RT 4: 1506617-1511611 bp Neighborhood of RT #1 [583256, 586764] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025898, 1031529] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1327058, 1332478] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1506617, 1511613] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 583256-583987 bp Feature: domain Description: Laminin_G_3 Location: 583577-583931 bp Feature: domain Description: Laminin_G_3 Location: 583 577-583 93 1 bp Feature: gene Location: 583984-584193 bp Feature: gene Location: 584643-586130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585048-585738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585048-58573 8 bp Feature: gene Location: 586208-586447 bp Feature: gene Location: 586447-586764 bp Feature: domain Description: PRK10276 Location: 586453-586567 bp Feature: domain Description: PRK10276 Location: 586453 -586567 bp Feature: domain Description: PRK10276 Location: 586594-586663 bp Feature: domain Description: PRK10276 Location: 586594-586663 bp Feature: gene Location: 1025898-1026461 bp Feature: domain Description: YbjK Location: 1025904-1026441 bp Feature: domain Description: YbjK Location: 1025904-1026441 bp Feature: gene Location: 1026584-1027636 bp Feature: domain Description: int Location: 1026587-1027586 bp Feature: domain Description: int Location: 1026587-1027586 bp Feature: gene Location: 1028052-1029539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028457-1029147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028457-1029147 bp Feature: gene Location: 1029638-1030582 bp Feature: gene Location: 1030594-1031529 bp Feature: domain Description: Phage_CI_repr Location: 1030678-1030861 bp Feature: domain Description: Phage_CI_repr Location: 103 0678-103 0861 bp Feature: domain Description: Phage_CI_repr Location: 1030990-1031182 bp Feature: domain Description: Phage_CI_repr Location: 103 0990-103 1182 bp Feature: domain Description: Phage_CI_C Location: 1031209-1031503 bp Feature: domain Description: Phage_CI_C Location: 103 1209-103 1503 bp Feature: gene Location: 1327058-1328197 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1327241-1328141 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 27241-13 28141 bp Feature: gene Location: 1328368-1328610 bp Feature: domain Description: DinI Location: 1328419-1328599 bp Feature: domain Description: DinI Location: 13 28419-13 28599 bp Feature: gene Location: 1329225-1330712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1329630-1330320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 2963 0-13 3 03 20 bp Feature: gene Location: 1330791-1331210 bp Feature: domain Description: PRK10276 Location: 1330794-1331205 bp Feature: domain Description: PRK10276 Location: 13 3 0794-13 3 1205 bp Feature: gene Location: 1331213-1332478 bp Feature: domain Description: umuC Location: 1331216-1332476 bp Feature: domain Description: umuC Location: 13 3 1216-13 3 2476 bp Feature: gene Location: 1506617-1507888 bp Feature: domain Description: umuC Location: 1506620-1507883 bp Feature: domain Description: umuC Location: 1506620-1507883 bp Feature: gene Location: 1507888-1508313 bp Feature: domain Description: PRK10276 Location: 1507891-1508299 bp Feature: domain Description: PRK10276 Location: 1507891-1508299 bp Feature: gene Location: 1508716-1510203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1509121-1509811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1509121-1509811 bp Feature: gene Location: 1510437-1510667 bp Feature: gene Location: 1511188-1511613 bp Feature: domain Description: Antirestrict Location: 1511323-1511611 bp Feature: domain Description: Antirestrict Location: 15113 23 -1511611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Antirestrict (pfam03230)