myRT

myRT report for GCA_000693575.1_Kleb_pneu_CHS_30_V1

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Seq: KK736979.1 Klebsiella pneumoniae CHS 30 genomic scaffold aedZf-supercont1.1, whole genome shotgun sequence (5581134 bp)
Overview 1 RT 1: 746820-750227 bp 2 RT 2: 1189657-1195262 bp 3 RT 3: 1532757-1538175 bp 4 RT 4: 1725609-1730980 bp 5 RT 5: 3091236-3097719 bp Neighborhood of RT #1 [746820, 750328] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1189657, 1195288] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1532757, 1538177] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1725609, 1730982] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [3091236, 3097721] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 746820-747551 bp Feature: domain Description: Laminin_G_3 Location: 747141-747495 bp Feature: domain Description: Laminin_G_3 Location: 7471 41 -747495 bp Feature: gene Location: 747548-747757 bp Feature: gene Location: 748207-749694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748612-749302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74861 2-749302 bp Feature: gene Location: 749772-750011 bp Feature: gene Location: 750011-750328 bp Feature: domain Description: PRK10276 Location: 750017-750131 bp Feature: domain Description: PRK1 0276 Location: 75001 7-7501 31 bp Feature: domain Description: PRK10276 Location: 750158-750227 bp Feature: domain Description: PRK1 0276 Location: 7501 58-750227 bp Feature: gene Location: 1189657-1190220 bp Feature: domain Description: YbjK Location: 1189663-1190200 bp Feature: domain Description: YbjK Location: 1 1 89663-1 1 90200 bp Feature: gene Location: 1190343-1191395 bp Feature: domain Description: int Location: 1190346-1191345 bp Feature: domain Description: int Location: 1 1 90346-1 1 91 345 bp Feature: gene Location: 1191811-1193298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1192216-1192906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 9221 6-1 1 92906 bp Feature: gene Location: 1193397-1194341 bp Feature: gene Location: 1194353-1195288 bp Feature: domain Description: Phage_CI_repr Location: 1194437-1194620 bp Feature: domain Description: Phage_CI_repr Location: 1 1 94437-1 1 94620 bp Feature: domain Description: Phage_CI_repr Location: 1194749-1194941 bp Feature: domain Description: Phage_CI_repr Location: 1 1 94749-1 1 94941 bp Feature: domain Description: Phage_CI_C Location: 1194968-1195262 bp Feature: domain Description: Phage_CI_C Location: 1 1 94968-1 1 95262 bp Feature: gene Location: 1532757-1533896 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1532940-1533840 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 532940-1 533840 bp Feature: gene Location: 1534067-1534309 bp Feature: domain Description: DinI Location: 1534118-1534298 bp Feature: domain Description: DinI Location: 1 5341 1 8-1 534298 bp Feature: gene Location: 1534924-1536411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1535329-1536019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 535329-1 53601 9 bp Feature: gene Location: 1536490-1536909 bp Feature: domain Description: PRK10276 Location: 1536493-1536904 bp Feature: domain Description: PRK1 0276 Location: 1 536493-1 536904 bp Feature: gene Location: 1536912-1538177 bp Feature: domain Description: umuC Location: 1536915-1538175 bp Feature: domain Description: umuC Location: 1 53691 5-1 5381 75 bp Feature: gene Location: 1725609-1725819 bp Feature: gene Location: 1725885-1726334 bp Feature: domain Description: PinE Location: 1725894-1726326 bp Feature: domain Description: PinE Location: 1 725894-1 726326 bp Feature: gene Location: 1727729-1729216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1728134-1728824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7281 34-1 728824 bp Feature: gene Location: 1729209-1729715 bp Feature: domain Description: PRK10276 Location: 1729299-1729710 bp Feature: domain Description: PRK1 0276 Location: 1 729299-1 72971 0 bp Feature: gene Location: 1729717-1730982 bp Feature: domain Description: umuC Location: 1729720-1730980 bp Feature: domain Description: umuC Location: 1 729720-1 730980 bp Feature: gene Location: 3091236-3092294 bp Feature: domain Description: YccC Location: 3091242-3092280 bp Feature: domain Description: YccC Location: 3091 242-3092280 bp Feature: gene Location: 3092393-3092866 bp Feature: domain Description: PRK10016 Location: 3092396-3092855 bp Feature: domain Description: PRK1 001 6 Location: 3092396-3092855 bp Feature: gene Location: 3092948-3094435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3093353-3094043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3093353-3094043 bp Feature: gene Location: 3094953-3096116 bp Feature: domain Description: dacD Location: 3094956-3096111 bp Feature: domain Description: dacD Location: 3094956-30961 1 1 bp Feature: gene Location: 3096297-3097721 bp Feature: domain Description: SbcB Location: 3096303-3097719 bp Feature: domain Description: SbcB Location: 3096303-309771 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736980.1 Klebsiella pneumoniae CHS 30 genomic scaffold aedZf-supercont1.2, whole genome shotgun sequence (213412 bp)
Overview 1 RT 1: 64754-69748 bp Neighborhood of RT #1 [64754, 69750] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 64754-66025 bp Feature: domain Description: umuC Location: 64757-66020 bp Feature: domain Description: umuC Location: 64757-6602 0 bp Feature: gene Location: 66025-66450 bp Feature: domain Description: PRK10276 Location: 66028-66436 bp Feature: domain Description: PRK102 76 Location: 6602 8-66436 bp Feature: gene Location: 66853-68340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67258-67948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 672 58-67948 bp Feature: gene Location: 68574-68804 bp Feature: gene Location: 69325-69750 bp Feature: domain Description: Antirestrict Location: 69460-69748 bp Feature: domain Description: Antirestrict Location: 69460-69748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)