myRT

myRT report for GCA_000693595.1_Kleb_pneu_CHS_31_V1

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Seq: KK736984.1 Klebsiella pneumoniae CHS 31 genomic scaffold aeebr-supercont1.1, whole genome shotgun sequence (5198478 bp)
Overview 1 RT 1: 328189-331596 bp 2 RT 2: 769475-775080 bp 3 RT 3: 1113139-1118557 bp 4 RT 4: 1292577-1298442 bp 5 RT 5: 2589039-2595522 bp Neighborhood of RT #1 [328189, 331697] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [769475, 775106] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1113139, 1118559] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1292577, 1298444] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2589039, 2595524] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 328189-328920 bp Feature: domain Description: Laminin_G_3 Location: 328510-328864 bp Feature: domain Description: Laminin_G_3 Location: 32851 0-328864 bp Feature: gene Location: 328917-329126 bp Feature: gene Location: 329576-331063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329981-330671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329981 -330671 bp Feature: gene Location: 331141-331380 bp Feature: gene Location: 331380-331697 bp Feature: domain Description: PRK10276 Location: 331386-331500 bp Feature: domain Description: PRK1 0276 Location: 331 386-331 500 bp Feature: domain Description: PRK10276 Location: 331527-331596 bp Feature: domain Description: PRK1 0276 Location: 331 527-331 596 bp Feature: gene Location: 769475-770038 bp Feature: domain Description: YbjK Location: 769481-770018 bp Feature: domain Description: YbjK Location: 769481 -77001 8 bp Feature: gene Location: 770161-771213 bp Feature: domain Description: int Location: 770164-771163 bp Feature: domain Description: int Location: 7701 64-771 1 63 bp Feature: gene Location: 771629-773116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772034-772724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772034-772724 bp Feature: gene Location: 773215-774159 bp Feature: gene Location: 774171-775106 bp Feature: domain Description: Phage_CI_repr Location: 774255-774438 bp Feature: domain Description: Phage_CI_repr Location: 774255-774438 bp Feature: domain Description: Phage_CI_repr Location: 774567-774759 bp Feature: domain Description: Phage_CI_repr Location: 774567-774759 bp Feature: domain Description: Phage_CI_C Location: 774786-775080 bp Feature: domain Description: Phage_CI_C Location: 774786-775080 bp Feature: gene Location: 1113139-1114278 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1113322-1114222 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 1 1 3322-1 1 1 4222 bp Feature: gene Location: 1114449-1114691 bp Feature: domain Description: DinI Location: 1114500-1114680 bp Feature: domain Description: DinI Location: 1 1 1 4500-1 1 1 4680 bp Feature: gene Location: 1115306-1116793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1115711-1116401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 571 1 -1 1 1 6401 bp Feature: gene Location: 1116872-1117291 bp Feature: domain Description: PRK10276 Location: 1116875-1117286 bp Feature: domain Description: PRK1 0276 Location: 1 1 1 6875-1 1 1 7286 bp Feature: gene Location: 1117294-1118559 bp Feature: domain Description: umuC Location: 1117297-1118557 bp Feature: domain Description: umuC Location: 1 1 1 7297-1 1 1 8557 bp Feature: gene Location: 1292577-1293281 bp Feature: domain Description: Rve Location: 1292580-1293225 bp Feature: domain Description: Rve Location: 1 292580-1 293225 bp Feature: gene Location: 1293347-1293796 bp Feature: domain Description: PinE Location: 1293356-1293788 bp Feature: domain Description: PinE Location: 1 293356-1 293788 bp Feature: gene Location: 1295191-1296678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1295596-1296286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 295596-1 296286 bp Feature: gene Location: 1296671-1297177 bp Feature: domain Description: PRK10276 Location: 1296761-1297172 bp Feature: domain Description: PRK1 0276 Location: 1 296761 -1 2971 72 bp Feature: gene Location: 1297179-1298444 bp Feature: domain Description: umuC Location: 1297182-1298442 bp Feature: domain Description: umuC Location: 1 2971 82-1 298442 bp Feature: gene Location: 2589039-2590097 bp Feature: domain Description: YccC Location: 2589045-2590083 bp Feature: domain Description: YccC Location: 2589045-2590083 bp Feature: gene Location: 2590196-2590669 bp Feature: domain Description: PRK10016 Location: 2590199-2590658 bp Feature: domain Description: PRK1 001 6 Location: 25901 99-2590658 bp Feature: gene Location: 2590751-2592238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2591156-2591846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2591 1 56-2591 846 bp Feature: gene Location: 2592756-2593919 bp Feature: domain Description: dacD Location: 2592759-2593914 bp Feature: domain Description: dacD Location: 2592759-259391 4 bp Feature: gene Location: 2594100-2595524 bp Feature: domain Description: SbcB Location: 2594106-2595522 bp Feature: domain Description: SbcB Location: 25941 06-2595522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK736986.1 Klebsiella pneumoniae CHS 31 genomic scaffold aeebr-supercont1.3, whole genome shotgun sequence (73214 bp)
Overview 1 RT 1: 2505-7499 bp Neighborhood of RT #1 [2505, 7501] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 2505-3776 bp Feature: domain Description: umuC Location: 2508-3771 bp Feature: domain Description: umuC Location: 2 508-3771 bp Feature: gene Location: 3776-4201 bp Feature: domain Description: PRK10276 Location: 3779-4187 bp Feature: domain Description: PRK102 76 Location: 3779-4187 bp Feature: gene Location: 4604-6091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5009-5699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5009-5699 bp Feature: gene Location: 6325-6555 bp Feature: gene Location: 7076-7501 bp Feature: domain Description: Antirestrict Location: 7211-7499 bp Feature: domain Description: Antirestrict Location: 72 11-7499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)