myRT

myRT report for GCA_000693615.1_Kleb_pneu_CHS_32_V1

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Seq: KK737009.1 Klebsiella pneumoniae CHS 32 genomic scaffold aeeap-supercont1.10, whole genome shotgun sequence (19319 bp)
Overview 1 RT 1: 15833-19027 bp Neighborhood of RT #1 [15833, 19319] umuC PRK10276 RVT-GII Feature: gene Location: 15833-17104 bp Feature: domain Description: umuC Location: 15836-17099 bp Feature: domain Description: umuC Location: 1 5836-1 7099 bp Feature: gene Location: 17104-17529 bp Feature: domain Description: PRK10276 Location: 17107-17515 bp Feature: domain Description: PRK1 0276 Location: 1 71 07-1 751 5 bp Feature: gene Location: 17932-19319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18337-19027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8337-1 9027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK737008.1 Klebsiella pneumoniae CHS 32 genomic scaffold aeeap-supercont1.9, whole genome shotgun sequence (26150 bp)
Overview 1 RT 1: 5089-10571 bp Neighborhood of RT #1 [5089, 10579] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 5089-5760 bp Feature: domain Description: Plasmid_stab_B Location: 5104-5311 bp Feature: domain Description: Plasmid_stab_B Location: 5104-5311 bp Feature: domain Description: Plasmid_stab_B Location: 5416-5623 bp Feature: domain Description: Plasmid_stab_B Location: 5416-562 3 bp Feature: gene Location: 5763-6734 bp Feature: domain Description: StbA Location: 5766-6711 bp Feature: domain Description: StbA Location: 5766-6711 bp Feature: gene Location: 7307-8794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7712-8402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7712 -8402 bp Feature: gene Location: 8877-9308 bp Feature: domain Description: PRK10276 Location: 8928-9291 bp Feature: domain Description: PRK102 76 Location: 892 8-92 91 bp Feature: gene Location: 9308-10579 bp Feature: domain Description: umuC Location: 9311-10571 bp Feature: domain Description: umuC Location: 9311-10571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737000.1 Klebsiella pneumoniae CHS 32 genomic scaffold aeeap-supercont1.1, whole genome shotgun sequence (3828045 bp)
Overview 1 RT 1: 557-6422 bp 2 RT 2: 1372811-1379294 bp Neighborhood of RT #1 [557, 6424] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1372811, 1379296] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 557-1261 bp Feature: domain Description: Rve Location: 560-1205 bp Feature: domain Description: Rve Location: 560-1205 bp Feature: gene Location: 1327-1776 bp Feature: domain Description: PinE Location: 1336-1768 bp Feature: domain Description: PinE Location: 13 3 6-1768 bp Feature: gene Location: 3171-4658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3576-4266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 576-4266 bp Feature: gene Location: 4651-5157 bp Feature: domain Description: PRK10276 Location: 4741-5152 bp Feature: domain Description: PRK10276 Location: 4741-5152 bp Feature: gene Location: 5159-6424 bp Feature: domain Description: umuC Location: 5162-6422 bp Feature: domain Description: umuC Location: 5162-6422 bp Feature: gene Location: 1372811-1373869 bp Feature: domain Description: YccC Location: 1372817-1373855 bp Feature: domain Description: YccC Location: 13 72817-13 73 855 bp Feature: gene Location: 1373968-1374441 bp Feature: domain Description: PRK10016 Location: 1373971-1374430 bp Feature: domain Description: PRK10016 Location: 13 73 971-13 7443 0 bp Feature: gene Location: 1374523-1376010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374928-1375618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 74928-13 75618 bp Feature: gene Location: 1376528-1377691 bp Feature: domain Description: dacD Location: 1376531-1377686 bp Feature: domain Description: dacD Location: 13 7653 1-13 77686 bp Feature: gene Location: 1377872-1379296 bp Feature: domain Description: SbcB Location: 1377878-1379294 bp Feature: domain Description: SbcB Location: 13 77878-13 79294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK737001.1 Klebsiella pneumoniae CHS 32 genomic scaffold aeeap-supercont1.2, whole genome shotgun sequence (1554108 bp)
Overview 1 RT 1: 586953-590360 bp 2 RT 2: 1029384-1034989 bp 3 RT 3: 1372481-1377899 bp Neighborhood of RT #1 [586953, 590461] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1029384, 1035015] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1372481, 1377901] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 586953-587684 bp Feature: domain Description: Laminin_G_3 Location: 587274-587628 bp Feature: domain Description: Laminin_G_3 Location: 587274 -587628 bp Feature: gene Location: 587681-587890 bp Feature: gene Location: 588340-589827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588745-589435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58874 5-5894 35 bp Feature: gene Location: 589905-590144 bp Feature: gene Location: 590144-590461 bp Feature: domain Description: PRK10276 Location: 590150-590264 bp Feature: domain Description: PRK10276 Location: 590150-590264 bp Feature: domain Description: PRK10276 Location: 590291-590360 bp Feature: domain Description: PRK10276 Location: 590291-590360 bp Feature: gene Location: 1029384-1029947 bp Feature: domain Description: YbjK Location: 1029390-1029927 bp Feature: domain Description: YbjK Location: 1029390-1029927 bp Feature: gene Location: 1030070-1031122 bp Feature: domain Description: int Location: 1030073-1031072 bp Feature: domain Description: int Location: 1030073-1031072 bp Feature: gene Location: 1031538-1033025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031943-1032633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103194 3-1032633 bp Feature: gene Location: 1033124-1034068 bp Feature: gene Location: 1034080-1035015 bp Feature: domain Description: Phage_CI_repr Location: 1034164-1034347 bp Feature: domain Description: Phage_CI_repr Location: 1034 164 -1034 34 7 bp Feature: domain Description: Phage_CI_repr Location: 1034476-1034668 bp Feature: domain Description: Phage_CI_repr Location: 1034 4 76-1034 668 bp Feature: domain Description: Phage_CI_C Location: 1034695-1034989 bp Feature: domain Description: Phage_CI_C Location: 1034 695-1034 989 bp Feature: gene Location: 1372481-1373620 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372664-1373564 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372664 -1373564 bp Feature: gene Location: 1373791-1374033 bp Feature: domain Description: DinI Location: 1373842-1374022 bp Feature: domain Description: DinI Location: 137384 2-1374 022 bp Feature: gene Location: 1374648-1376135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375053-1375743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375053-137574 3 bp Feature: gene Location: 1376214-1376633 bp Feature: domain Description: PRK10276 Location: 1376217-1376628 bp Feature: domain Description: PRK10276 Location: 1376217-1376628 bp Feature: gene Location: 1376636-1377901 bp Feature: domain Description: umuC Location: 1376639-1377899 bp Feature: domain Description: umuC Location: 1376639-1377899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)