myRT

myRT report for GCA_000693635.1_Kleb_pneu_CHS_33_V1

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Seq: KK737015.1 Klebsiella pneumoniae CHS 33 genomic scaffold aeebg-supercont1.3, whole genome shotgun sequence (498793 bp)
Overview 1 RT 1: 137-5232 bp Neighborhood of RT #1 [137, 5234] PinE RVT-GII PRK10276 umuC Feature: gene Location: 137-586 bp Feature: domain Description: PinE Location: 146-578 bp Feature: domain Description: PinE Location: 1 46-578 bp Feature: gene Location: 1981-3468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2386-3076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2386-3076 bp Feature: gene Location: 3461-3967 bp Feature: domain Description: PRK10276 Location: 3551-3962 bp Feature: domain Description: PRK1 0276 Location: 3551 -3962 bp Feature: gene Location: 3969-5234 bp Feature: domain Description: umuC Location: 3972-5232 bp Feature: domain Description: umuC Location: 3972-5232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737020.1 Klebsiella pneumoniae CHS 33 genomic scaffold aeebg-supercont1.8, whole genome shotgun sequence (74375 bp)
Overview 1 RT 1: 67147-72138 bp Neighborhood of RT #1 [67147, 72143] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 67147-67572 bp Feature: domain Description: Antirestrict Location: 67282-67570 bp Feature: domain Description: Antirestrict Location: 672 82 -67570 bp Feature: gene Location: 68093-68323 bp Feature: gene Location: 68557-70044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68962-69652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68962 -69652 bp Feature: gene Location: 70447-70872 bp Feature: domain Description: PRK10276 Location: 70450-70858 bp Feature: domain Description: PRK102 76 Location: 70450-70858 bp Feature: gene Location: 70872-72143 bp Feature: domain Description: umuC Location: 70875-72138 bp Feature: domain Description: umuC Location: 70875-72 138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737013.1 Klebsiella pneumoniae CHS 33 genomic scaffold aeebg-supercont1.1, whole genome shotgun sequence (2897810 bp)
Overview 1 RT 1: 884429-890912 bp Neighborhood of RT #1 [884429, 890914] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884429-885487 bp Feature: domain Description: YccC Location: 884435-885473 bp Feature: domain Description: YccC Location: 88443 5-885473 bp Feature: gene Location: 885586-886059 bp Feature: domain Description: PRK10016 Location: 885589-886048 bp Feature: domain Description: PRK10016 Location: 885589-886048 bp Feature: gene Location: 886141-887628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886546-887236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886546-88723 6 bp Feature: gene Location: 888146-889309 bp Feature: domain Description: dacD Location: 888149-889304 bp Feature: domain Description: dacD Location: 888149-8893 04 bp Feature: gene Location: 889490-890914 bp Feature: domain Description: SbcB Location: 889496-890912 bp Feature: domain Description: SbcB Location: 889496-890912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK737014.1 Klebsiella pneumoniae CHS 33 genomic scaffold aeebg-supercont1.2, whole genome shotgun sequence (1298885 bp)
Overview 1 RT 1: 329354-332761 bp 2 RT 2: 771996-777601 bp 3 RT 3: 1115092-1120510 bp Neighborhood of RT #1 [329354, 332862] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [771996, 777627] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1115092, 1120512] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 329354-330085 bp Feature: domain Description: Laminin_G_3 Location: 329675-330029 bp Feature: domain Description: Laminin_G_3 Location: 329675-330029 bp Feature: gene Location: 330082-330291 bp Feature: gene Location: 330741-332228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331146-331836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33114 6-331836 bp Feature: gene Location: 332306-332545 bp Feature: gene Location: 332545-332862 bp Feature: domain Description: PRK10276 Location: 332551-332665 bp Feature: domain Description: PRK10276 Location: 332551-332665 bp Feature: domain Description: PRK10276 Location: 332692-332761 bp Feature: domain Description: PRK10276 Location: 332692-332761 bp Feature: gene Location: 771996-772559 bp Feature: domain Description: YbjK Location: 772002-772539 bp Feature: domain Description: YbjK Location: 772002-772539 bp Feature: gene Location: 772682-773734 bp Feature: domain Description: int Location: 772685-773684 bp Feature: domain Description: int Location: 772685-773684 bp Feature: gene Location: 774150-775637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774555-775245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774 555-77524 5 bp Feature: gene Location: 775736-776680 bp Feature: gene Location: 776692-777627 bp Feature: domain Description: Phage_CI_repr Location: 776776-776959 bp Feature: domain Description: Phage_CI_repr Location: 776776-776959 bp Feature: domain Description: Phage_CI_repr Location: 777088-777280 bp Feature: domain Description: Phage_CI_repr Location: 777088-777280 bp Feature: domain Description: Phage_CI_C Location: 777307-777601 bp Feature: domain Description: Phage_CI_C Location: 777307-777601 bp Feature: gene Location: 1115092-1116231 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115275-1116175 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115275-1116175 bp Feature: gene Location: 1116402-1116644 bp Feature: domain Description: DinI Location: 1116453-1116633 bp Feature: domain Description: DinI Location: 11164 53-1116633 bp Feature: gene Location: 1117259-1118746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117664-1118354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117664 -1118354 bp Feature: gene Location: 1118825-1119244 bp Feature: domain Description: PRK10276 Location: 1118828-1119239 bp Feature: domain Description: PRK10276 Location: 1118828-1119239 bp Feature: gene Location: 1119247-1120512 bp Feature: domain Description: umuC Location: 1119250-1120510 bp Feature: domain Description: umuC Location: 1119250-1120510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)