myRT

myRT report for GCA_000693655.1_Kleb_pneu_CHS_34_V1

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Seq: KK737028.1 Klebsiella pneumoniae CHS 34 genomic scaffold aedZD-supercont1.1, whole genome shotgun sequence (5595055 bp)
Overview 1 RT 1: 584125-587532 bp 2 RT 2: 1026767-1032372 bp 3 RT 3: 1370285-1375703 bp 4 RT 4: 2932392-2938875 bp 5 RT 5: 3383343-3386824 bp Neighborhood of RT #1 [584125, 587633] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026767, 1032398] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370285, 1375705] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2932392, 2938877] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #5 [3383343, 3386824] Terminase_2 RVT-GII Feature: gene Location: 584125-584856 bp Feature: domain Description: Laminin_G_3 Location: 584446-584800 bp Feature: domain Description: Laminin_G_3 Location: 584446-584800 bp Feature: gene Location: 584853-585062 bp Feature: gene Location: 585512-586999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585917-586607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58591 7-586607 bp Feature: gene Location: 587077-587316 bp Feature: gene Location: 587316-587633 bp Feature: domain Description: PRK10276 Location: 587322-587436 bp Feature: domain Description: PRK1 0276 Location: 587322-587436 bp Feature: domain Description: PRK10276 Location: 587463-587532 bp Feature: domain Description: PRK1 0276 Location: 587463-587532 bp Feature: gene Location: 1026767-1027330 bp Feature: domain Description: YbjK Location: 1026773-1027310 bp Feature: domain Description: YbjK Location: 1 026773-1 02731 0 bp Feature: gene Location: 1027453-1028505 bp Feature: domain Description: int Location: 1027456-1028455 bp Feature: domain Description: int Location: 1 027456-1 028455 bp Feature: gene Location: 1028921-1030408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029326-1030016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029326-1 03001 6 bp Feature: gene Location: 1030507-1031451 bp Feature: gene Location: 1031463-1032398 bp Feature: domain Description: Phage_CI_repr Location: 1031547-1031730 bp Feature: domain Description: Phage_CI_repr Location: 1 031 547-1 031 730 bp Feature: domain Description: Phage_CI_repr Location: 1031859-1032051 bp Feature: domain Description: Phage_CI_repr Location: 1 031 859-1 032051 bp Feature: domain Description: Phage_CI_C Location: 1032078-1032372 bp Feature: domain Description: Phage_CI_C Location: 1 032078-1 032372 bp Feature: gene Location: 1370285-1371424 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370468-1371368 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 370468-1 371 368 bp Feature: gene Location: 1371595-1371837 bp Feature: domain Description: DinI Location: 1371646-1371826 bp Feature: domain Description: DinI Location: 1 371 646-1 371 826 bp Feature: gene Location: 1372452-1373939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372857-1373547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372857-1 373547 bp Feature: gene Location: 1374018-1374437 bp Feature: domain Description: PRK10276 Location: 1374021-1374432 bp Feature: domain Description: PRK1 0276 Location: 1 374021 -1 374432 bp Feature: gene Location: 1374440-1375705 bp Feature: domain Description: umuC Location: 1374443-1375703 bp Feature: domain Description: umuC Location: 1 374443-1 375703 bp Feature: gene Location: 2932392-2933450 bp Feature: domain Description: YccC Location: 2932398-2933436 bp Feature: domain Description: YccC Location: 2932398-2933436 bp Feature: gene Location: 2933549-2934022 bp Feature: domain Description: PRK10016 Location: 2933552-2934011 bp Feature: domain Description: PRK1 001 6 Location: 2933552-293401 1 bp Feature: gene Location: 2934104-2935591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2934509-2935199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2934509-29351 99 bp Feature: gene Location: 2936109-2937272 bp Feature: domain Description: dacD Location: 2936112-2937267 bp Feature: domain Description: dacD Location: 29361 1 2-2937267 bp Feature: gene Location: 2937453-2938877 bp Feature: domain Description: SbcB Location: 2937459-2938875 bp Feature: domain Description: SbcB Location: 2937459-2938875 bp Feature: gene Location: 3383343-3383927 bp Feature: domain Description: Terminase_2 Location: 3383388-3383853 bp Feature: domain Description: Terminase_2 Location: 3383388-3383853 bp Feature: gene Location: 3384005-3384262 bp Feature: gene Location: 3384663-3386150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3385068-3385758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3385068-3385758 bp Feature: gene Location: 3386247-3386585 bp Feature: gene Location: 3386585-3386824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), Terminase_2 (pfam03592)

Seq: KK737029.1 Klebsiella pneumoniae CHS 34 genomic scaffold aedZD-supercont1.2, whole genome shotgun sequence (136220 bp)
Overview 1 RT 1: 60625-65616 bp Neighborhood of RT #1 [60625, 65621] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 60625-61050 bp Feature: domain Description: Antirestrict Location: 60760-61048 bp Feature: domain Description: Antirestrict Location: 60760-61048 bp Feature: gene Location: 61571-61801 bp Feature: gene Location: 62035-63522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62440-63130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 440-63130 bp Feature: gene Location: 63925-64350 bp Feature: domain Description: PRK10276 Location: 63928-64336 bp Feature: domain Description: PRK102 76 Location: 6392 8-64336 bp Feature: gene Location: 64350-65621 bp Feature: domain Description: umuC Location: 64353-65616 bp Feature: domain Description: umuC Location: 64353-65616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)