myRT

myRT report for GCA_000693715.1_Kleb_pneu_CHS_37_V1

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Seq: KK737061.1 Klebsiella pneumoniae CHS 37 genomic scaffold aedZz-supercont1.1, whole genome shotgun sequence (3381055 bp)
Overview 1 RT 1: 85643-95464 bp 2 RT 2: 1465194-1470221 bp Neighborhood of RT #1 [85643, 95466] umuC PRK10276 RVT-GII Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1465194, 1470223] PRK10016 RVT-GII dacD SbcB Feature: gene Location: 85643-86914 bp Ori: KDJ26602.1 Feature: domain Description: umuC Location: 85646-86909 bp Feature: domain Description: umuC Location: 85646-86909 bp Feature: gene Location: 86914-87339 bp Ori: KDJ26603.1 Feature: domain Description: PRK10276 Location: 86917-87325 bp Feature: domain Description: PRK1 0276 Location: 8691 7-87325 bp Feature: gene Location: 87742-89160 bp Ori: KDJ26604.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88147-88837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881 47-88837 bp Feature: gene Location: 89235-89939 bp Ori: KDJ26605.1 Feature: domain Description: Rve Location: 89238-89883 bp Feature: domain Description: Rve Location: 89238-89883 bp Feature: gene Location: 90005-90454 bp Ori: KDJ26606.1 Feature: domain Description: PinE Location: 90014-90446 bp Feature: domain Description: PinE Location: 9001 4-90446 bp Feature: gene Location: 91849-93068 bp Ori: KDJ26607.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92254-92944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92254-92944 bp Feature: gene Location: 93576-94199 bp Ori: KDJ26167.1 Feature: domain Description: PRK10276 Location: 93783-94194 bp Feature: domain Description: PRK1 0276 Location: 93783-941 94 bp Feature: gene Location: 94201-95466 bp Ori: KDJ26168.1 Feature: domain Description: umuC Location: 94204-95464 bp Feature: domain Description: umuC Location: 94204-95464 bp Feature: gene Location: 1465194-1465667 bp Ori: KDJ25362.1 Feature: domain Description: PRK10016 Location: 1465197-1465656 bp Feature: domain Description: PRK1 001 6 Location: 1 4651 97-1 465656 bp Feature: gene Location: 1466028-1466310 bp Feature: gene Location: 1466411-1466937 bp Ori: KDJ23588.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1466816-1466933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 46681 6-1 466933 bp Feature: gene Location: 1467455-1468618 bp Ori: KDJ23589.1 Feature: domain Description: dacD Location: 1467458-1468613 bp Feature: domain Description: dacD Location: 1 467458-1 46861 3 bp Feature: gene Location: 1468799-1470223 bp Ori: KDJ23590.1 Feature: domain Description: SbcB Location: 1468805-1470221 bp Feature: domain Description: SbcB Location: 1 468805-1 470221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Rve (COG3316), PinE (COG1961), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK737062.1 Klebsiella pneumoniae CHS 37 genomic scaffold aedZz-supercont1.2, whole genome shotgun sequence (1305602 bp)
Overview 1 RT 1: 329324-332989 bp 2 RT 2: 772222-777827 bp 3 RT 3: 1115488-1120906 bp Neighborhood of RT #1 [329324, 333090] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [772222, 777853] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1115488, 1120908] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 329324-330055 bp Ori: KDJ19861.1 Feature: domain Description: Laminin_G_3 Location: 329645-329999 bp Feature: domain Description: Laminin_G_3 Location: 32 9645-32 9999 bp Feature: gene Location: 330052-330261 bp Feature: gene Location: 330711-331949 bp Ori: KDJ19863.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331116-331806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331116-331806 bp Feature: gene Location: 332534-332773 bp Feature: gene Location: 332773-333090 bp Ori: KDJ18400.1 Feature: domain Description: PRK10276 Location: 332779-332893 bp Feature: domain Description: PRK102 76 Location: 332 779-332 893 bp Feature: domain Description: PRK10276 Location: 332920-332989 bp Feature: domain Description: PRK102 76 Location: 332 92 0-332 989 bp Feature: gene Location: 772222-772785 bp Ori: KDJ18794.1 Feature: domain Description: YbjK Location: 772228-772765 bp Feature: domain Description: YbjK Location: 772 2 2 8-772 765 bp Feature: gene Location: 772908-773960 bp Ori: KDJ18795.1 Feature: domain Description: int Location: 772911-773910 bp Feature: domain Description: int Location: 772 911-773910 bp Feature: gene Location: 774376-775863 bp Ori: KDJ18796.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774781-775471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774781-775471 bp Feature: gene Location: 775962-776906 bp Feature: gene Location: 776918-777853 bp Ori: KDJ18798.1 Feature: domain Description: Phage_CI_repr Location: 777002-777185 bp Feature: domain Description: Phage_CI_repr Location: 777002 -777185 bp Feature: domain Description: Phage_CI_repr Location: 777314-777506 bp Feature: domain Description: Phage_CI_repr Location: 777314-777506 bp Feature: domain Description: Phage_CI_C Location: 777533-777827 bp Feature: domain Description: Phage_CI_C Location: 777533-77782 7 bp Feature: gene Location: 1115488-1116627 bp Ori: KDJ17843.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115671-1116571 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115671-1116571 bp Feature: gene Location: 1116798-1117040 bp Ori: KDJ17844.1 Feature: domain Description: DinI Location: 1116849-1117029 bp Feature: domain Description: DinI Location: 1116849-111702 9 bp Feature: gene Location: 1117655-1119142 bp Ori: KDJ17845.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118060-1118750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118060-1118750 bp Feature: gene Location: 1119221-1119640 bp Ori: KDJ17846.1 Feature: domain Description: PRK10276 Location: 1119224-1119635 bp Feature: domain Description: PRK102 76 Location: 11192 2 4-1119635 bp Feature: gene Location: 1119643-1120908 bp Ori: KDJ17847.1 Feature: domain Description: umuC Location: 1119646-1120906 bp Feature: domain Description: umuC Location: 1119646-112 0906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)